SMTL ID : 1oiw.1

X-ray structure of the small G protein Rab11a in complex with GTPgammaS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x GSP: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE(Non-covalent)

GSP.1: 24 residues within 4Å: Chain A: D.37, S.38, G.39, V.40, G.41, K.42, S.43, N.44, F.54, N.55, L.56, S.58, S.60, T.61, A.86, G.87, N.142, K.143, D.145, L.146, S.172, A.173, L.174 Ligands: MG.2 24 PLIP interactions: 24 interactions with chain A Hydrogen bonds: A:G.39, A:V.40, A:G.41, A:K.42, A:K.42, A:S.43, A:N.44, A:N.44, A:N.55, A:T.61, A:G.87, A:N.142, A:K.143, A:K.143, A:A.173, A:L.174 Water bridges: A:S.38, A:K.42, A:S.43, A:K.59, A:T.61 Salt bridges: A:K.42, A:D.145 pi-Stacking: A:F.54

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: S.43, T.61, D.84 Ligands: GSP.1 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.43, A:T.61, H2O.2, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pasqualato, S. et al., The Structural Gdp/GTP Cycle of Rab11 Reveals a Novel Interface Involved in the Dynamics of Recycling Endosomes. J.Biol.Chem. (2004)

Release Date

2004-01-08

Peptides

RAS-RELATED PROTEIN RAB-11A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RAS-RELATED PROTEIN RAB-11A

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