SMTL ID : 1oj4.2 (1 other biounit)

Ternary complex of 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

monomer

Ligands

1 x CDM: 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL(Non-covalent)

CDM.1: 17 residues within 4Å: Chain A: K.10, N.12, G.24, Y.25, H.26, L.28, F.32, S.108, G.139, A.140, D.141, V.156, T.181, F.185, G.239, T.240 Ligands: ANP.2 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:Y.25, A:T.240 Hydrogen bonds: A:K.10, A:N.12, A:Y.25, A:Y.25, A:H.26, A:H.26, A:H.26, A:S.108, A:A.140, A:D.141, A:D.141, A:T.181 Water bridges: A:D.141, A:D.141, A:T.181 pi-Stacking: A:F.185

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.2: 20 residues within 4Å: Chain A: K.10, V.60, D.64, N.65, L.66, I.67, K.96, P.99, M.100, G.101, G.102, G.103, L.104, G.105, G.106, G.107, S.108, N.110, D.141 Ligands: CDM.1 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:N.65, A:N.65, A:L.66, A:K.96, A:G.101, A:G.101, A:G.103, A:G.103, A:L.104, A:G.105, A:G.106, A:G.107, A:S.108, A:S.108, A:D.141 Water bridges: A:S.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miallau, L. et al., Biosynthesis of Isoprenoids: Crystal Structure of 4-Diphosphocytidyl-2C-Methyl-D-Erythritol Kinase. Proc.Natl.Acad.Sci.USA (2003)

Release Date

2003-07-31

Peptides

4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE

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