SMTL ID : 1olo.1

Hexameric Replicative DNA Helicase RepA from Plasmid RSF1010 - Cubic Crystal Structure

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

homo-hexamer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 9 residues within 4Å: Chain A: S.37, P.38, G.39, G.40, A.41, G.42, K.43, S.44, H.179 12 PLIP interactions: 10 interactions with chain A, 2 interactions with chain D Hydrogen bonds: A:S.37, A:G.40, A:G.40, A:A.41, A:G.42, A:K.43, A:S.44 Water bridges: A:M.45, D:R.207, D:R.207 Salt bridges: A:K.43, A:H.179 SO4.2: 10 residues within 4Å: Chain A: R.207 Chain B: S.37, P.38, G.39, G.40, A.41, G.42, K.43, S.44, H.179 15 PLIP interactions: 10 interactions with chain B, 5 interactions with chain A Hydrogen bonds: B:S.37, B:G.40, B:A.41, B:G.42, B:K.43, B:S.44 Water bridges: B:G.42, B:M.45, A:R.207, A:R.207, A:R.207, A:R.207 Salt bridges: B:K.43, B:H.179, A:R.207 SO4.3: 9 residues within 4Å: Chain C: S.37, P.38, G.39, G.40, A.41, G.42, K.43, S.44, H.179 12 PLIP interactions: 10 interactions with chain C, 2 interactions with chain F Hydrogen bonds: C:S.37, C:G.40, C:G.40, C:A.41, C:G.42, C:K.43, C:S.44 Water bridges: C:M.45, F:R.207, F:R.207 Salt bridges: C:K.43, C:H.179 SO4.4: 10 residues within 4Å: Chain C: R.207 Chain D: S.37, P.38, G.39, G.40, A.41, G.42, K.43, S.44, H.179 15 PLIP interactions: 10 interactions with chain D, 5 interactions with chain C Hydrogen bonds: D:S.37, D:G.40, D:A.41, D:G.42, D:K.43, D:S.44 Water bridges: D:G.42, D:M.45, C:R.207, C:R.207, C:R.207, C:R.207 Salt bridges: D:K.43, D:H.179, C:R.207 SO4.5: 9 residues within 4Å: Chain E: S.37, P.38, G.39, G.40, A.41, G.42, K.43, S.44, H.179 12 PLIP interactions: 10 interactions with chain E, 2 interactions with chain B Hydrogen bonds: E:S.37, E:G.40, E:G.40, E:A.41, E:G.42, E:K.43, E:S.44 Water bridges: E:M.45, B:R.207, B:R.207 Salt bridges: E:K.43, E:H.179 SO4.6: 10 residues within 4Å: Chain E: R.207 Chain F: S.37, P.38, G.39, G.40, A.41, G.42, K.43, S.44, H.179 15 PLIP interactions: 5 interactions with chain E, 10 interactions with chain F Water bridges: E:R.207, E:R.207, E:R.207, E:R.207, F:G.42, F:M.45 Salt bridges: E:R.207, F:K.43, F:H.179 Hydrogen bonds: F:S.37, F:G.40, F:A.41, F:G.42, F:K.43, F:S.44

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ziegelin, G. et al., Hexameric Rsf1010 Helicase Repa: The Structural and Functional Importance of Single Amino Acid Residues. Nucleic Acids Res. (2003)

Release Date

2003-09-19

Peptides

REGULATORY PROTEIN REPA: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

REGULATORY PROTEIN REPA

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