SMTL ID : 1omx.2 (1 other biounit)

Crystal structure of mouse alpha-1,4-N-acetylhexosaminyltransferase (EXTL2)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-octamer

Ligands

12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: F.134, Q.137, P.223, I.226, I.277 Chain B: Q.133, F.134 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.137 Water bridges: A:Q.137, A:K.222, A:G.225 EDO.2: 4 residues within 4Å: Chain A: N.183, K.185, Y.186, H.219 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.219 EDO.3: 5 residues within 4Å: Chain A: F.134 Chain B: F.134, Q.137, P.223, I.226 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:Q.137 Water bridges: B:K.222, B:G.225, B:S.275 EDO.4: 7 residues within 4Å: Chain C: F.134, Q.137, P.223, I.226, I.277 Chain D: Q.133, F.134 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:Q.137 Water bridges: C:Q.137, C:K.222, C:G.225 EDO.5: 4 residues within 4Å: Chain C: N.183, K.185, Y.186, H.219 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:H.219 EDO.6: 5 residues within 4Å: Chain C: F.134 Chain D: F.134, Q.137, P.223, I.226 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:Q.137 Water bridges: D:K.222, D:G.225, D:S.275 EDO.7: 7 residues within 4Å: Chain E: F.134, Q.137, P.223, I.226, I.277 Chain F: Q.133, F.134 4 PLIP interactions: 4 interactions with chain E Hydrogen bonds: E:Q.137 Water bridges: E:Q.137, E:K.222, E:G.225 EDO.8: 4 residues within 4Å: Chain E: N.183, K.185, Y.186, H.219 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:H.219 EDO.9: 5 residues within 4Å: Chain E: F.134 Chain F: F.134, Q.137, P.223, I.226 4 PLIP interactions: 4 interactions with chain F Hydrogen bonds: F:Q.137 Water bridges: F:K.222, F:G.225, F:S.275 EDO.10: 7 residues within 4Å: Chain G: F.134, Q.137, P.223, I.226, I.277 Chain H: Q.133, F.134 4 PLIP interactions: 4 interactions with chain G Hydrogen bonds: G:Q.137 Water bridges: G:Q.137, G:K.222, G:G.225 EDO.11: 4 residues within 4Å: Chain G: N.183, K.185, Y.186, H.219 1 PLIP interactions: 1 interactions with chain G Hydrogen bonds: G:H.219 EDO.12: 5 residues within 4Å: Chain G: F.134 Chain H: F.134, Q.137, P.223, I.226 4 PLIP interactions: 4 interactions with chain H Hydrogen bonds: H:Q.137 Water bridges: H:K.222, H:G.225, H:S.275

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pedersen, L.C. et al., Crystal structure of an alpha-1,4-N-acetylhexosaminyltransferase (EXTL2), a member of the exostosin gene family involved in heparan sulfate biosynthesis. J.Biol.Chem. (2003)

Release Date

2003-04-22

Peptides

Alpha-1,4-N-acetylhexosaminyltransferase EXTL2: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

G
A

H
B

Alpha-1,4-N-acetylhexosaminyltransferase EXTL2

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