SMTL ID : 1opl.3 (2 other biounits)

Structural basis for the auto-inhibition of c-Abl tyrosine kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.42 Å

Oligo State

homo-dimer

Ligands

2 x MYR: MYRISTIC ACID(Non-covalent)

MYR.1: 10 residues within 4Å: Chain A: A.356, L.359, L.360, A.363, E.481, G.482, P.484, I.521, V.525, L.529 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.356, A:L.359, A:L.360, A:A.363, A:I.521, A:V.525, A:L.529 MYR.3: 10 residues within 4Å: Chain B: A.356, L.359, L.360, A.363, E.481, G.482, P.484, I.521, V.525, L.529 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:A.356, B:L.359, B:L.360, B:A.363, B:I.521, B:V.525, B:L.529

2 x P16: 6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE(Non-covalent)

P16.2: 19 residues within 4Å: Chain A: L.267, G.268, Y.272, V.275, A.288, V.289, K.290, E.305, M.309, I.332, T.334, E.335, F.336, M.337, G.340, L.389, A.399, D.400, F.401 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.288, A:K.290, A:I.332, A:T.334, A:L.389, A:F.401 Hydrogen bonds: A:M.337, A:M.337 pi-Cation interactions: A:K.290 P16.4: 19 residues within 4Å: Chain B: L.267, G.268, Y.272, V.275, A.288, V.289, K.290, E.305, M.309, I.332, T.334, E.335, F.336, M.337, G.340, L.389, A.399, D.400, F.401 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:A.288, B:K.290, B:I.332, B:T.334, B:L.389, B:F.401 Hydrogen bonds: B:M.337, B:M.337 pi-Cation interactions: B:K.290

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nagar, B. et al., Structural basis for the autoinhibition of c-Abl tyrosine kinase. Cell(Cambridge,Mass.) (2003)

Release Date

2003-04-08

Peptides

proto-oncogene tyrosine-protein kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

proto-oncogene tyrosine-protein kinase

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