SMTL ID : 1osf.1

Human Hsp90 in complex with 17-desmethoxy-17-N,N-Dimethylaminoethylamino-Geldanamycin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x KOS: 17-DESMETHOXY-17-N,N-DIMETHYLAMINOETHYLAMINO-GELDANAMYCIN(Non-covalent)

KOS.1: 17 residues within 4Å: Chain A: N.43, S.44, D.46, A.47, K.50, D.85, I.88, M.90, D.94, N.98, L.99, K.104, G.127, V.128, G.129, F.130, T.176 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:N.43, A:A.47, A:K.50, A:I.88, A:N.98, A:F.130 Hydrogen bonds: A:D.46, A:K.50, A:D.85, A:N.98, A:K.104, A:G.129, A:F.130 Water bridges: A:N.43, A:N.43, A:S.44, A:K.50, A:D.85, A:G.127, A:T.176, A:T.176 Salt bridges: A:D.46

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 4 residues within 4Å: Chain A: D.49, K.50, Y.53 Ligands: ACY.4 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Y.53 MPD.3: 1 residues within 4Å: Chain A: F.205 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:F.205

2 x ACY: ACETIC ACID(Non-functional Binders)

ACY.4: 4 residues within 4Å: Chain A: K.50, Y.53, E.54 Ligands: MPD.2 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:E.54 Water bridges: A:K.50 ACY.5: 1 residues within 4Å: Chain A: Q.125 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Q.125 Hydrogen bonds: A:Q.125

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jez, J.M. et al., Crystal Structure and Molecular Modeling of 17-DMAG in Complex with Human Hsp90. Chem.Biol. (2003)

Release Date

2003-05-27

Peptides

heat shock 90kDa protein 1, alpha; heat shock 90kD protein 1, alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

heat shock 90kDa protein 1, alpha; heat shock 90kD protein 1, alpha