SMTL ID : 1ov5.1

T4 Lysozyme Cavity Mutant L99a/M102Q Bound With 2-Allylphenol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: T.142, P.143, N.144, R.145 Ligand excluded by PLIP CL.2: 2 residues within 4Å: Chain A: A.49, Q.69 Ligand excluded by PLIP

1 x 2LP: 2-ALLYLPHENOL(Non-covalent)

2LP.3: 13 residues within 4Å: Chain A: I.78, L.84, V.87, Y.88, A.99, Q.102, V.103, V.111, F.114, L.118, L.121, L.133, F.153 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.78, A:L.84, A:V.87, A:Y.88, A:A.99, A:V.103, A:V.111, A:F.114, A:L.121, A:L.133, A:F.153 Hydrogen bonds: A:Q.102

2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.4: 3 residues within 4Å: Chain A: D.72, V.75, R.76 No protein-ligand interaction detected (PLIP) BME.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wei, B.Q. et al., Testing a Flexible-receptor Docking Algorithm in a Model Binding Site. J.Mol.Biol. (2004)

Release Date

2004-04-06

Peptides

Lysozyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lysozyme

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