SMTL ID : 1oxv.3 (2 other biounits)

Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: T.45, Q.89 Ligands: ANP.13 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:T.45, H2O.5, H2O.5

11 x IOD: IODIDE ION(Non-functional Binders)

IOD.2: 3 residues within 4Å: Chain A: F.64, R.67, K.83 Ligand excluded by PLIP IOD.3: 2 residues within 4Å: Chain A: Q.147, L.151 Ligand excluded by PLIP IOD.4: 1 residues within 4Å: Chain A: F.88 Ligand excluded by PLIP IOD.5: 3 residues within 4Å: Chain A: Y.94, P.95, N.96 Ligand excluded by PLIP IOD.6: 3 residues within 4Å: Chain A: V.220, S.234, Q.236 Ligand excluded by PLIP IOD.7: 1 residues within 4Å: Chain A: N.8 Ligand excluded by PLIP IOD.8: 2 residues within 4Å: Chain A: L.93, Q.146 Ligand excluded by PLIP IOD.9: 1 residues within 4Å: Chain A: K.17 Ligand excluded by PLIP IOD.10: 2 residues within 4Å: Chain A: R.49, F.88 Ligand excluded by PLIP IOD.11: 3 residues within 4Å: Chain A: I.294, K.344, D.345 Ligand excluded by PLIP IOD.12: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.13: 14 residues within 4Å: Chain A: F.13, A.20, P.39, S.40, G.41, A.42, G.43, K.44, T.45, T.46, Q.89, E.166, H.199 Ligands: MG.1 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:S.40, A:G.41, A:A.42, A:G.43, A:K.44, A:K.44, A:T.45, A:T.46, A:Q.89 Water bridges: A:K.14, A:G.41, A:T.45, A:T.45, A:T.45, A:Q.89 pi-Stacking: A:F.13, A:F.13

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Verdon, G. et al., Crystal structures of the ATPase subunit of the glucose ABC transporter from Sulfolobus solfataricus: nucleotide-free and nucleotide-bound conformations. J.Mol.Biol. (2003)

Release Date

2003-06-17

Peptides

ABC transporter, ATP binding protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

ABC transporter, ATP binding protein

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