SMTL ID : 1p0c.1

Crystal Structure of the NADP(H)-Dependent Vertebrate Alcohol Dehydrogenase (ADH8)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.98, G.99, C.101, C.104, C.112 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.98, A:C.101, A:C.104, A:C.112 ZN.2: 4 residues within 4Å: Chain A: C.47, S.49, H.68, C.174 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.47, A:H.68, A:C.174, H2O.5 ZN.5: 5 residues within 4Å: Chain B: C.98, G.99, C.101, C.104, C.112 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.98, B:C.101, B:C.104, B:C.112 ZN.6: 4 residues within 4Å: Chain B: C.47, S.49, H.68, C.174 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:C.47, B:H.68, B:C.174, H2O.12

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 6 residues within 4Å: Chain A: C.47, G.48, G.201, G.202, V.203, R.368 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.48, A:G.202, A:V.203 Water bridges: A:G.201, A:G.204 Salt bridges: A:R.368 PO4.7: 6 residues within 4Å: Chain B: C.47, G.48, G.201, G.202, V.203, R.368 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:G.48, B:G.202, B:V.203 Water bridges: B:G.201, B:G.204 Salt bridges: B:R.368

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 8 residues within 4Å: Chain A: G.199, L.200, V.222, G.223, T.224, H.225, K.228, R.271 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:L.200, A:T.224, A:T.224, A:H.225, A:K.228, A:R.271 Water bridges: A:G.199 GOL.8: 6 residues within 4Å: Chain B: G.199, L.200, G.223, T.224, H.225, K.228 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:L.200, B:L.200, B:T.224, B:T.224, B:H.225, B:H.225 Water bridges: B:G.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rosell, A. et al., Crystal Structure of the Vertebrate NADP(H)-dependent Alcohol Dehydrogenase (ADH8). J.Mol.Biol. (2003)

Release Date

2003-04-22

Peptides

NADP-dependent ALCOHOL DEHYDROGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

NADP-dependent ALCOHOL DEHYDROGENASE

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