SMTL ID : 1p44.1 (1 other biounit)

Targeting tuberculosis and malaria through inhibition of enoyl reductase: compound activity and structural data

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 24 residues within 4Å: Chain A: G.14, I.15, I.16, S.20, I.21, F.41, L.63, D.64, V.65, S.94, I.95, G.96, I.122, M.147, D.148, F.149, M.161, K.165, A.191, G.192, P.193, I.194, T.196 Ligands: GEQ.3 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:I.21, A:F.149, A:A.191 Hydrogen bonds: A:I.15, A:I.21, A:D.64, A:V.65, A:I.95, A:G.96, A:K.165, A:I.194, A:I.194, A:T.196 Water bridges: A:A.22, A:A.22 pi-Stacking: A:F.41, A:F.41 NAD.2: 24 residues within 4Å: Chain B: G.14, I.15, I.16, S.20, I.21, F.41, L.63, D.64, V.65, S.94, I.95, G.96, I.122, M.147, D.148, F.149, M.161, K.165, A.191, G.192, P.193, I.194, T.196 Ligands: GEQ.4 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:I.21, B:F.149, B:A.191 Hydrogen bonds: B:I.15, B:I.21, B:D.64, B:D.64, B:V.65, B:S.94, B:G.96, B:K.165, B:I.194, B:I.194 Water bridges: B:S.20, B:A.22, B:S.94 NAD.5: 24 residues within 4Å: Chain C: G.14, I.15, I.16, S.20, I.21, F.41, L.63, D.64, V.65, S.94, I.95, G.96, I.122, M.147, D.148, F.149, M.161, K.165, A.191, G.192, P.193, I.194, T.196 Ligands: GEQ.7 17 PLIP interactions: 17 interactions with chain C Hydrophobic interactions: C:I.21, C:F.149, C:A.191 Hydrogen bonds: C:I.15, C:I.21, C:D.64, C:D.64, C:V.65, C:I.95, C:G.96, C:K.165, C:I.194, C:I.194 Water bridges: C:A.22, C:A.22 pi-Stacking: C:F.41, C:F.41 NAD.6: 24 residues within 4Å: Chain D: G.14, I.15, I.16, S.20, I.21, F.41, L.63, D.64, V.65, S.94, I.95, G.96, I.122, M.147, D.148, F.149, M.161, K.165, A.191, G.192, P.193, I.194, T.196 Ligands: GEQ.8 16 PLIP interactions: 16 interactions with chain D Hydrophobic interactions: D:I.21, D:F.149, D:A.191 Hydrogen bonds: D:I.15, D:I.21, D:D.64, D:V.65, D:S.94, D:G.96, D:K.165, D:I.194, D:I.194, D:T.196 Water bridges: D:S.20, D:A.22, D:S.94

4 x GEQ: 5-{[4-(9H-FLUOREN-9-YL)PIPERAZIN-1-YL]CARBONYL}-1H-INDOLE(Non-covalent)

GEQ.3: 12 residues within 4Å: Chain A: G.96, M.103, F.149, M.155, P.156, A.157, Y.158, M.161, P.193, I.215, L.218 Ligands: NAD.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.149, A:A.157, A:P.193, A:I.215, A:I.215, A:L.218 pi-Stacking: A:Y.158 GEQ.4: 12 residues within 4Å: Chain B: G.96, F.97, M.98, M.103, F.149, A.157, Y.158, M.161, M.199, I.215, L.218 Ligands: NAD.2 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:F.149, B:A.157, B:I.215, B:I.215, B:L.218 Hydrogen bonds: B:Y.158 Water bridges: B:G.96 pi-Stacking: B:Y.158 GEQ.7: 12 residues within 4Å: Chain C: G.96, M.103, F.149, M.155, P.156, A.157, Y.158, M.161, P.193, I.215, L.218 Ligands: NAD.5 8 PLIP interactions: 8 interactions with chain C Hydrophobic interactions: C:F.149, C:A.157, C:P.193, C:I.215, C:I.215, C:L.218 Hydrogen bonds: C:Y.158 pi-Stacking: C:Y.158 GEQ.8: 12 residues within 4Å: Chain D: G.96, F.97, M.98, M.103, F.149, A.157, Y.158, M.161, M.199, I.215, L.218 Ligands: NAD.6 7 PLIP interactions: 7 interactions with chain D Hydrophobic interactions: D:F.149, D:A.157, D:I.215, D:I.215, D:L.218 Water bridges: D:G.96 pi-Stacking: D:Y.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuo, M.R. et al., Targeting tuberculosis and malaria through inhibition of Enoyl reductase: compound activity and structural data. J.Biol.Chem. (2003)

Release Date

2003-09-16

Peptides

Enoyl-[acyl-carrier-protein] reductase [NADH]: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Enoyl-[acyl-carrier-protein] reductase [NADH]

Related Entries With Identical Sequence