SMTL ID : 1p8l.1

New Crystal Structure of Chlorella Virus DNA Ligase-Adenylate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.95 Å

Oligo State

monomer

Ligands

1 x AMP: ADENOSINE MONOPHOSPHATE(Covalent)

AMP.1: 11 residues within 4Å: Chain A: T.31, P.32, K.33, I.34, D.35, R.38, E.73, F.104, M.170, L.190, K.192 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:T.31, A:P.32, A:I.34, A:D.35, A:R.38, A:K.192, A:K.192 Salt bridges: A:K.33, A:K.192, A:K.194 pi-Stacking: A:F.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Odell, M. et al., Analysis of the DNA Joining Repertoire of Chlorella Virus DNA ligase and a New Crystal Structure of the Ligase-Adenylate Intermediate. Nucleic Acids Res. (2003)

Release Date

2003-08-26

Peptides

PBCV-1 DNA ligase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PBCV-1 DNA ligase