SMTL ID : 1pd1.1

Crystal structure of the COPII coat subunit, Sec24, complexed with a peptide containing the DxE cargo sorting signal of yeast Sys1 protein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x GLN- LEU- LYS- ASP- LEU- GLU- SER- GLN- ILE: DxE cargo sorting signal peptide of yeast Sys1 protein(Non-covalent)

GLN-LEU-LYS-ASP-LEU-GLU-SER-GLN-ILE.1: 14 residues within 4Å: Chain A: R.114, R.119, Y.121, E.179, Y.180, L.182, R.443, R.445, S.463, S.464, L.466, A.498, L.500, R.508 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:R.119, A:Y.180, A:L.182, A:L.466 Hydrogen bonds: A:R.114, A:R.114, A:R.119, A:Y.121, A:E.179, A:R.443, A:R.443, A:R.445 Salt bridges: A:R.114, A:R.443, A:R.443, A:R.445

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain A: C.115, C.118, C.137, C.140 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.115, A:C.118, A:C.137, A:C.140

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mossessova, E. et al., SNARE selectivity of the COPII coat. Cell(Cambridge,Mass.) (2003)

Release Date

2003-08-19

Peptides

Protein transport protein Sec24: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein transport protein Sec24

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