SMTL ID : 1pd2.1

CRYSTAL STRUCTURE OF HEMATOPOIETIC PROSTAGLANDIN D SYNTHASE COMPLEX WITH GLUTATHIONE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x GSH: GLUTATHIONE(Non-covalent)

GSH.1: 12 residues within 4Å: Chain A: Y.8, F.9, R.14, W.39, K.43, K.50, I.51, P.52, Q.63, S.64, L.65 Chain B: D.97 14 PLIP interactions: 13 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:K.50 Hydrogen bonds: A:R.14, A:W.39, A:I.51, A:I.51, A:Q.63, A:Q.63, A:S.64, A:S.64, B:D.97 Water bridges: A:L.65 Salt bridges: A:R.14, A:K.43, A:K.50 GSH.2: 11 residues within 4Å: Chain A: D.97 Chain B: Y.8, R.14, W.39, K.43, K.50, I.51, P.52, Q.63, S.64, L.65 15 PLIP interactions: 14 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:K.50 Hydrogen bonds: B:R.14, B:W.39, B:I.51, B:I.51, B:Q.63, B:Q.63, B:S.64, B:S.64, A:D.97 Water bridges: B:L.65, B:L.65 Salt bridges: B:R.14, B:K.43, B:K.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kanaoka, Y. et al., Cloning and crystal structure of hematopoietic prostaglandin D synthase. Cell(Cambridge,Mass.) (1997)

Release Date

1999-10-13

Peptides

HEMATOPOIETIC PROSTAGLANDIN D SYNTHASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

B
2

HEMATOPOIETIC PROSTAGLANDIN D SYNTHASE

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