SMTL ID : 1pex.1

COLLAGENASE-3 (MMP-13) C-TERMINAL HEMOPEXIN-LIKE DOMAIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: P.67, N.68, R.69, R.86 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.68, A:R.69, A:R.69 Salt bridges: A:R.86

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 8 residues within 4Å: Chain A: A.28, I.29, A.72, A.73, A.120, A.121, V.170 Ligands: CA.4 Ligand excluded by PLIP CL.5: 3 residues within 4Å: Chain A: Y.74, E.75 Ligands: CA.4 Ligand excluded by PLIP

2 x CA: CALCIUM ION(Non-covalent)

CA.3: 4 residues within 4Å: Chain A: D.27, D.71, S.119, D.168 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.27, A:D.71, A:S.119, A:D.168 CA.4: 6 residues within 4Å: Chain A: I.29, A.73, A.121, V.170 Ligands: CL.2, CL.5 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:I.29, A:A.73, A:A.121, A:V.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gomis-Ruth, F.X. et al., The helping hand of collagenase-3 (MMP-13): 2.7 A crystal structure of its C-terminal haemopexin-like domain. J.Mol.Biol. (1996)

Release Date

1996-12-23

Peptides

COLLAGENASE-3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

COLLAGENASE-3