SMTL ID : 1pip.1

CRYSTAL STRUCTURE OF PAPAIN-SUCCINYL-GLN-VAL-VAL-ALA-ALA-P-NITROANILIDE COMPLEX AT 1.7 ANGSTROMS RESOLUTION: NONCOVALENT BINDING MODE OF A COMMON SEQUENCE OF ENDOGENOUS THIOL PROTEASE INHIBITORS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x ZKO- VAL- VAL- ALA- ALA- NIT: SUCCINYL-GLN-VAL-VAL-ALA-ALA-P-NITROANILIDE(Non-covalent)

ZKO-VAL-VAL-ALA-ALA-NIT.1: 8 residues within 4Å: Chain A: G.65, A.136, A.137, Q.142, K.156, V.157, D.158, W.177 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.137, A:K.156, A:K.156, A:D.158 Hydrogen bonds: A:K.156, A:D.158 Salt bridges: A:K.156

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamamoto, A. et al., Crystal structure of papain-succinyl-Gln-Val-Val-Ala-Ala-p-nitroanilide complex at 1.7-A resolution: noncovalent binding mode of a common sequence of endogenous thiol protease inhibitors. Biochemistry (1992)

Release Date

1993-10-31

Peptides

Papain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Papain

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