SMTL ID : 1pja.1

The crystal structure of palmitoyl protein thioesterase-2 reveals the basis for divergent substrate specificities of the two lysosomal thioesterases (PPT1 and PPT2)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.1: 2 residues within 4Å: Chain A: N.190, R.202 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.190

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: H.204, P.205, N.206 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.204, A:N.206 GOL.3: 5 residues within 4Å: Chain A: D.72, L.73, F.74, D.75, E.78 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:F.74, A:D.75 GOL.4: 7 residues within 4Å: Chain A: S.111, Q.142, T.146, Y.148, L.149, Y.178, V.230 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.111, A:T.146, A:L.149 Water bridges: A:Q.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Calero, G. et al., The crystal structure of palmitoyl protein thioesterase-2 (PPT2) reveals the basis for divergent substrate specificities of the two lysosomal thioesterases, PPT1 and PPT2. J.Biol.Chem. (2003)

Release Date

2003-09-02

Peptides

Palmitoyl-protein thioesterase 2 precursor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Palmitoyl-protein thioesterase 2 precursor