- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 0.85 Å
- Oligo State
- monomer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 1 x ME2: 1-ETHOXY-2-(2-METHOXYETHOXY)ETHANE(Non-covalent)
- 2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
MES.4: 7 residues within 4Å:- Chain A: K.43, P.44, N.67, G.68, Y.69, G.70, R.91
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:K.43, A:G.70
- Water bridges: A:R.91, A:R.91, A:R.91
- Salt bridges: A:K.43, A:R.91
MES.5: 4 residues within 4Å:- Chain A: E.65, V.66, T.102, F.103
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:F.103
- Water bridges: A:F.103
- Salt bridges: A:E.104
- 8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.6: 6 residues within 4Å:- Chain A: V.167, D.168, Y.203, I.211, E.212
- Ligands: MXE.19
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:I.211
- Water bridges: A:D.168
EDO.7: 6 residues within 4Å:- Chain A: F.86, F.124, F.158, T.159, T.160
- Ligands: PEG.23
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:T.160, A:G.162
EDO.8: 3 residues within 4Å:- Chain A: R.115, E.138, A.142
1 PLIP interactions:1 interactions with chain A- Water bridges: A:R.115
EDO.9: 6 residues within 4Å:- Chain A: P.196, K.198, T.223, H.224, G.226
- Ligands: PGE.14
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.198, A:T.223
- Water bridges: A:G.226
EDO.10: 5 residues within 4Å:- Chain A: H.219, I.220, P.221, Q.258, P.259
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Q.258
EDO.11: 3 residues within 4Å:- Chain A: M.148, E.225
- Ligands: PGE.14
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:E.225, A:E.225
EDO.12: 3 residues within 4Å:- Chain A: G.256, G.257, Q.258
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Q.258
EDO.13: 2 residues within 4Å:- Chain A: P.18, E.37
No protein-ligand interaction detected (PLIP)- 2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
PGE.14: 7 residues within 4Å:- Chain A: M.148, Q.172, P.196, T.197, E.225
- Ligands: EDO.9, EDO.11
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:M.148, A:Q.172
PGE.15: 4 residues within 4Å:- Chain A: T.279, K.280, T.281, E.296
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:K.280, A:K.280, A:T.281, A:T.281
- 3 x DXE: 1,2-DIMETHOXYETHANE(Non-covalent)
DXE.16: 5 residues within 4Å:- Chain A: K.151, W.201, K.214
- Ligands: MXE.19, MXE.20
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.151
DXE.17: 3 residues within 4Å:- Chain A: W.244, K.269, H.287
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.269
DXE.18: 3 residues within 4Å:- Chain A: P.8, E.296, W.297
1 PLIP interactions:1 interactions with chain A- Water bridges: A:L.9
- 2 x MXE: 2-METHOXYETHANOL(Non-covalent)
MXE.19: 5 residues within 4Å:- Chain A: E.212, N.213, K.214
- Ligands: EDO.6, DXE.16
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.213, A:K.214
MXE.20: 8 residues within 4Å:- Chain A: K.151, T.169, A.170, F.171, E.194, W.201, K.214
- Ligands: DXE.16
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:K.151
- Water bridges: A:T.197
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.23: 5 residues within 4Å:- Chain A: Q.84, F.86, I.106, F.158
- Ligands: EDO.7
2 PLIP interactions:2 interactions with chain A- Water bridges: A:D.79, A:Q.84
PEG.24: 4 residues within 4Å:- Chain A: K.63, P.64, E.65, F.103
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:K.63, A:E.65, A:E.65
- Water bridges: A:K.63
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Koepke, J. et al., Statistical analysis of crystallographic data obtained from squid ganglion DFPase at 0.85 A resolution. Acta Crystallogr.,Sect.D (2003)
- Release Date
- 2004-06-08
- Peptides
- DIISOPROPYLFLUOROPHOSPHATASE: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 0.85 Å
- Oligo State
- monomer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 1 x ME2: 1-ETHOXY-2-(2-METHOXYETHOXY)ETHANE(Non-covalent)
- 2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
- 8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)
- 3 x DXE: 1,2-DIMETHOXYETHANE(Non-covalent)
- 2 x MXE: 2-METHOXYETHANOL(Non-covalent)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Koepke, J. et al., Statistical analysis of crystallographic data obtained from squid ganglion DFPase at 0.85 A resolution. Acta Crystallogr.,Sect.D (2003)
- Release Date
- 2004-06-08
- Peptides
- DIISOPROPYLFLUOROPHOSPHATASE: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A