SMTL ID : 1pnf.1

PNGASE F COMPLEX WITH DI-N-ACETYLCHITOBIOSE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NDG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose(Non-covalent)

NDG-NAG.1: 10 residues within 4Å: Chain A: W.59, D.60, R.61, Y.62, I.82, E.118, W.120, I.156, W.191, W.251 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:W.59, A:I.82, A:W.251 Hydrogen bonds: A:R.61, A:R.61, A:E.118, A:E.118, A:D.60, A:D.60, A:D.60, A:R.61 Water bridges: A:Y.62, A:S.155

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: K.41, P.138, D.139, Y.140, K.302 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:D.139, A:D.139, A:Y.140 Water bridges: A:K.104, A:K.104, A:K.104, A:K.181 Salt bridges: A:K.41, A:K.104, A:K.302

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kuhn, P. et al., Active site and oligosaccharide recognition residues of peptide-N4-(N-acetyl-beta-D-glucosaminyl)asparagine amidase F. J.Biol.Chem. (1995)

Release Date

1996-03-08

Peptides

PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL)ASPARAGINE AMIDASE F: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PEPTIDE-N(4)-(N-ACETYL-BETA-D-GLUCOSAMINYL)ASPARAGINE AMIDASE F

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