SMTL ID : 1pt1.1

Unprocessed Pyruvoyl Dependent Aspartate Decarboxylase with Histidine 11 Mutated to Alanine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-tetramer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 9 residues within 4Å: Chain A: G.41, T.74, N.89, G.90, A.91, A.92 Chain D: W.64, R.71, I.103 7 PLIP interactions: 6 interactions with chain A, 1 interactions with chain D Hydrogen bonds: A:T.74, A:N.89, A:A.91, A:A.92 Water bridges: A:S.42, A:S.42 Salt bridges: D:R.71 SO4.2: 8 residues within 4Å: Chain A: K.26, A.28, R.29, I.103, Y.124 Chain B: Y.39, E.40, G.41 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:E.40, B:G.41 Salt bridges: A:K.26, A:R.29 SO4.3: 6 residues within 4Å: Chain A: E.40, S.42, Y.75, I.77 Chain D: K.26, Y.124 6 PLIP interactions: 4 interactions with chain A, 2 interactions with chain D Hydrogen bonds: A:S.42, A:Y.75, D:Y.124 Water bridges: A:E.40, A:N.89 Salt bridges: D:K.26 SO4.4: 10 residues within 4Å: Chain A: W.64, R.71, I.103 Chain B: G.41, S.42, T.74, N.89, G.90, A.91, A.92 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:T.74, B:N.89, B:A.91, B:A.92 Salt bridges: A:R.71 SO4.5: 9 residues within 4Å: Chain B: W.64, R.71, I.103 Chain C: G.41, T.74, N.89, G.90, A.91, A.92 6 PLIP interactions: 5 interactions with chain C, 1 interactions with chain B Hydrogen bonds: C:N.89, C:A.91, C:A.92 Water bridges: C:S.42, C:T.74 Salt bridges: B:R.71 SO4.6: 8 residues within 4Å: Chain C: K.26, A.28, R.29, I.103, Y.124 Chain D: Y.39, E.40, G.41 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain D Salt bridges: C:K.26, C:R.29 Hydrogen bonds: D:G.41 SO4.7: 6 residues within 4Å: Chain B: K.26, Y.124 Chain C: E.40, S.42, Y.75, I.77 6 PLIP interactions: 5 interactions with chain C, 1 interactions with chain B Hydrogen bonds: C:S.42, C:Y.75, C:Y.75 Water bridges: C:E.40, C:N.89 Salt bridges: B:K.26 SO4.8: 10 residues within 4Å: Chain C: W.64, R.71, I.103 Chain D: G.41, S.42, T.74, N.89, G.90, A.91, A.92 5 PLIP interactions: 4 interactions with chain D, 1 interactions with chain C Hydrogen bonds: D:T.74, D:N.89, D:A.91, D:A.92 Salt bridges: C:R.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schmitzberger, F. et al., Structural constraints on protein self-processing in L-aspartate-alpha-decarboxylase. Embo J. (2003)

Release Date

2003-11-11

Peptides

Aspartate 1-decarboxylase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Aspartate 1-decarboxylase