- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.3: 4 residues within 4Å:- Chain A: P.16, Y.31, P.43, N.44
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:P.43
- Hydrogen bonds: A:N.44
NAG.4: 7 residues within 4Å:- Chain A: Y.378, Q.382, N.386, S.388, M.389, D.392, Y.393
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Y.378, A:N.386, A:M.389
NAG.8: 4 residues within 4Å:- Chain B: P.16, Y.31, P.43, N.44
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:P.43
- Hydrogen bonds: B:Y.31, B:N.44
NAG.9: 7 residues within 4Å:- Chain B: Y.378, Q.382, N.386, S.388, M.389, D.392, Y.393
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:Y.378, B:N.386, B:M.389, B:D.392
- 2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)
BOG.5: 11 residues within 4Å:- Chain A: R.59, P.60, P.62, W.76, L.91, V.92, V.95, R.96, L.99, F.446, E.500
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:W.76, A:L.91, A:V.92, A:V.95
- Hydrogen bonds: A:P.60, A:F.446
- Salt bridges: A:R.96
BOG.10: 11 residues within 4Å:- Chain B: R.59, P.60, P.62, W.76, L.91, V.92, V.95, R.96, L.99, F.446, E.500
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:W.76, B:L.91, B:V.92, B:V.95
- Hydrogen bonds: B:P.60, B:F.446
- Salt bridges: B:R.96
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.6: 19 residues within 4Å:- Chain A: Y.124, A.175, Q.179, H.183, F.186, K.187, T.188, L.271, N.358, Y.361, H.362, W.363, H.364, M.367, L.384, I.420, H.422, V.423, D.426
15 PLIP interactions:15 interactions with chain A,- Hydrophobic interactions: A:Q.179, A:F.186, A:L.271, A:W.363, A:L.384, A:I.420, A:V.423, A:V.423
- Hydrogen bonds: A:Y.124, A:T.188, A:N.358, A:V.423, A:D.426
- Salt bridges: A:H.422
- Metal complexes: A:H.364
HEM.11: 19 residues within 4Å:- Chain B: Y.124, A.175, Q.179, H.183, F.186, K.187, T.188, L.271, N.358, Y.361, H.362, W.363, H.364, M.367, L.384, I.420, H.422, V.423, D.426
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:Q.179, B:F.186, B:L.271, B:W.363, B:L.384, B:I.420, B:V.423, B:V.423
- Hydrogen bonds: B:Y.124, B:T.188, B:T.188, B:N.358, B:V.423
- Salt bridges: B:H.422
- Metal complexes: B:H.364
- 2 x SAL: 2-HYDROXYBENZOIC ACID(Non-covalent)
SAL.7: 8 residues within 4Å:- Chain A: V.92, R.96, V.325, L.328, Y.331, A.503, S.506, L.507
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:V.325, A:L.328, A:A.503
- Salt bridges: A:R.96
SAL.12: 8 residues within 4Å:- Chain B: V.92, R.96, V.325, L.328, Y.331, A.503, S.506, L.507
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:V.325, B:L.328, B:A.503
- Salt bridges: B:R.96
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Loll, P.J. et al., The structural basis of aspirin activity inferred from the crystal structure of inactivated prostaglandin H2 synthase. Nat.Struct.Biol. (1995)
- Release Date
- 1996-04-11
- Peptides
- PROSTAGLANDIN H2 SYNTHASE-1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.40 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 2 x SAL: 2-HYDROXYBENZOIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Loll, P.J. et al., The structural basis of aspirin activity inferred from the crystal structure of inactivated prostaglandin H2 synthase. Nat.Struct.Biol. (1995)
- Release Date
- 1996-04-11
- Peptides
- PROSTAGLANDIN H2 SYNTHASE-1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B