- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x K: POTASSIUM ION(Non-covalent)
- 4 x MZP: 4-CARBAMOYL-1-BETA-D-RIBOFURANOSYL-IMIDAZOLIUM-5-OLATE-5'-PHOSPHATE(Non-covalent)
MZP.4: 21 residues within 4Å:- Chain A: A.56, M.58, G.189, S.190, I.191, C.192, D.231, G.232, G.233, M.252, L.253, G.254, R.255, Y.278, G.280, E.281, G.282, R.291, Y.292, E.304, G.305
19 PLIP interactions:19 interactions with chain A- Hydrogen bonds: A:D.231, A:G.233, A:G.254, A:R.255, A:Y.278, A:E.281, A:G.282, A:S.283, A:R.291, A:R.291, A:Y.292, A:E.304
- Water bridges: A:I.57, A:N.164, A:G.189, A:G.232, A:G.232, A:Y.256
- pi-Cation interactions: A:R.291
MZP.9: 21 residues within 4Å:- Chain B: A.56, M.58, G.189, S.190, I.191, C.192, D.231, G.232, G.233, M.252, L.253, G.254, R.255, Y.278, G.280, E.281, G.282, R.291, Y.292, E.304, G.305
19 PLIP interactions:19 interactions with chain B- Hydrogen bonds: B:S.190, B:D.231, B:G.233, B:G.254, B:R.255, B:E.281, B:G.282, B:S.283, B:R.291, B:R.291, B:Y.292, B:E.304
- Water bridges: B:N.164, B:G.189, B:T.194, B:G.232, B:G.232, B:Y.256
- pi-Cation interactions: B:R.291
MZP.14: 21 residues within 4Å:- Chain C: A.56, M.58, G.189, S.190, I.191, C.192, D.231, G.232, G.233, M.252, L.253, G.254, R.255, Y.278, G.280, E.281, G.282, R.291, Y.292, E.304, G.305
21 PLIP interactions:21 interactions with chain C- Hydrogen bonds: C:S.190, C:D.231, C:G.233, C:G.254, C:R.255, C:E.281, C:G.282, C:S.283, C:R.291, C:R.291, C:Y.292, C:E.304
- Water bridges: C:N.164, C:G.187, C:G.187, C:G.189, C:D.231, C:G.232, C:I.234, C:Y.256
- pi-Cation interactions: C:R.291
MZP.17: 21 residues within 4Å:- Chain D: A.56, M.58, G.189, S.190, I.191, C.192, D.231, G.232, G.233, M.252, L.253, G.254, R.255, Y.278, G.280, E.281, G.282, R.291, Y.292, E.304, G.305
21 PLIP interactions:21 interactions with chain D- Hydrogen bonds: D:S.190, D:D.231, D:G.233, D:G.254, D:R.255, D:Y.278, D:E.281, D:G.282, D:S.283, D:R.291, D:Y.292, D:E.304
- Water bridges: D:N.164, D:G.187, D:G.189, D:D.231, D:G.232, D:G.232, D:I.234, D:Y.256
- pi-Cation interactions: D:R.291
- 6 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
TRS.5: 5 residues within 4Å:- Chain A: V.212, A.213, N.216
- Chain D: A.1, Y.3
5 PLIP interactions:3 interactions with chain D, 2 interactions with chain A- Hydrogen bonds: D:A.1, D:A.1, A:V.212, A:N.216
- Water bridges: D:A.1
TRS.6: 5 residues within 4Å:- Chain A: Y.14, I.209, L.350
- Chain D: Y.3, Y.4
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain D- Hydrogen bonds: A:Y.14, D:Y.4
- Water bridges: A:L.350
TRS.10: 7 residues within 4Å:- Chain B: D.237, Y.256, R.259, N.319, A.322, S.323, K.326
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:D.237, B:R.259, B:R.259
- Water bridges: B:N.319, B:N.319
TRS.11: 6 residues within 4Å:- Chain A: A.1, Y.3
- Chain B: V.212, A.213, N.216, M.246
7 PLIP interactions:4 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:A.1, A:A.1, A:A.1, B:N.216, B:M.246
- Water bridges: A:Y.3, B:A.213
TRS.15: 6 residues within 4Å:- Chain B: A.1, Y.3
- Chain C: V.212, A.213, N.216, M.246
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain C- Hydrogen bonds: B:A.1, B:A.1, C:N.216, C:M.246
- Water bridges: B:Y.3, C:A.213
TRS.18: 5 residues within 4Å:- Chain C: A.1, Y.3
- Chain D: V.212, A.213, N.216
6 PLIP interactions:3 interactions with chain D, 3 interactions with chain C- Hydrogen bonds: D:N.216, C:A.1, C:A.1
- Water bridges: D:A.213, D:R.215, C:A.1
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gan, L. et al., The Immunosuppressive Agent Mizoribine Monophosphate Forms a Transition State Analogue Complex with Inosine Monophosphate Dehydrogenase. Biochemistry (2003)
- Release Date
- 2003-07-22
- Peptides
- Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x K: POTASSIUM ION(Non-covalent)
- 4 x MZP: 4-CARBAMOYL-1-BETA-D-RIBOFURANOSYL-IMIDAZOLIUM-5-OLATE-5'-PHOSPHATE(Non-covalent)
- 6 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Gan, L. et al., The Immunosuppressive Agent Mizoribine Monophosphate Forms a Transition State Analogue Complex with Inosine Monophosphate Dehydrogenase. Biochemistry (2003)
- Release Date
- 2003-07-22
- Peptides
- Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D