SMTL ID : 1pwh.3 (3 other biounits)

Rat Liver L-Serine Dehydratase- Complex with PYRIDOXYL-(O-METHYL-SERINE)-5-MONOPHOSPHATE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x K: POTASSIUM ION(Non-covalent)

K.1: 6 residues within 4Å: Chain A: V.167, G.168, E.194, A.198, S.200, L.223 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.194, A:A.198

1 x PLV: N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-O-METHYL-L-SERINE(Non-covalent)

PLV.2: 25 residues within 4Å: Chain A: F.40, K.41, S.64, A.65, G.66, N.67, A.68, P.135, F.136, S.166, V.167, G.168, G.169, G.170, G.171, L.172, K.221, A.222, L.223, G.224, V.225, A.269, C.303, G.304, G.305 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.223 Hydrogen bonds: A:K.41, A:A.65, A:G.66, A:N.67, A:N.67, A:A.68, A:S.166, A:G.168, A:G.169, A:G.170, A:G.171, A:L.172 Salt bridges: A:K.41, A:K.41 pi-Stacking: A:F.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamada, T. et al., Crystal structure of serine dehydratase from rat liver. Biochemistry (2003)

Release Date

2003-12-02

Peptides

L-serine dehydratase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

L-serine dehydratase

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