- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x OXL: OXALATE ION(Non-covalent)
- 4 x A3D: 3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE(Non-covalent)
A3D.2: 27 residues within 4Å:- Chain A: G.16, G.18, M.19, I.20, Y.39, D.40, V.41, V.42, M.45, T.85, A.86, G.87, L.88, T.89, N.108, I.111, V.131, T.132, N.133, L.135, M.156, A.157, L.160, H.188, A.243, P.247
- Ligands: OXL.1
17 PLIP interactions:17 interactions with chain A- Hydrophobic interactions: A:I.20, A:L.135, A:A.157, A:L.160, A:P.247
- Hydrogen bonds: A:M.19, A:I.20, A:V.41, A:G.87, A:L.88, A:N.108, A:N.133, A:N.133
- Water bridges: A:G.18, A:G.21, A:S.242, A:S.242
A3D.4: 26 residues within 4Å:- Chain B: G.18, M.19, I.20, Y.39, D.40, V.41, V.42, M.45, T.85, A.86, G.87, L.88, T.89, N.108, I.111, V.131, T.132, N.133, L.135, M.156, A.157, L.160, H.188, A.243, P.247
- Ligands: OXL.3
17 PLIP interactions:17 interactions with chain B- Hydrophobic interactions: B:I.20, B:V.131, B:L.135, B:A.157, B:L.160, B:P.247
- Hydrogen bonds: B:M.19, B:I.20, B:V.41, B:G.87, B:L.88, B:N.108, B:N.133, B:N.133
- Water bridges: B:G.18, B:G.21, B:S.242
A3D.6: 28 residues within 4Å:- Chain C: G.16, S.17, G.18, M.19, I.20, Y.39, D.40, V.41, V.42, M.45, T.85, A.86, G.87, L.88, T.89, N.108, I.111, V.131, T.132, N.133, L.135, M.156, A.157, L.160, H.188, A.243, P.247
- Ligands: OXL.5
16 PLIP interactions:16 interactions with chain C- Hydrophobic interactions: C:I.20, C:L.135, C:A.157, C:L.160, C:P.247
- Hydrogen bonds: C:M.19, C:I.20, C:V.41, C:G.87, C:L.88, C:N.108, C:N.133, C:N.133
- Water bridges: C:G.18, C:G.21, C:S.242
A3D.8: 30 residues within 4Å:- Chain D: G.16, S.17, G.18, M.19, I.20, Y.39, D.40, V.41, V.42, M.45, T.85, A.86, G.87, L.88, T.89, L.104, N.108, I.111, V.131, T.132, N.133, L.135, M.156, A.157, L.160, H.188, S.242, A.243, P.247
- Ligands: OXL.7
15 PLIP interactions:15 interactions with chain D- Hydrophobic interactions: D:I.20, D:L.135, D:A.157, D:P.247
- Hydrogen bonds: D:G.18, D:M.19, D:I.20, D:V.41, D:G.87, D:L.88, D:N.108, D:N.133, D:N.133
- Water bridges: D:G.21, D:S.242
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kavanagh, K.L. et al., Structure of Toxoplasma gondii LDH1: Active-Site Differences from Human Lactate Dehydrogenases and the Structural Basis for Efficient APAD+ Use. Biochemistry (2004)
- Release Date
- 2004-02-24
- Peptides
- lactate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x OXL: OXALATE ION(Non-covalent)
- 4 x A3D: 3-ACETYLPYRIDINE ADENINE DINUCLEOTIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kavanagh, K.L. et al., Structure of Toxoplasma gondii LDH1: Active-Site Differences from Human Lactate Dehydrogenases and the Structural Basis for Efficient APAD+ Use. Biochemistry (2004)
- Release Date
- 2004-02-24
- Peptides
- lactate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D