- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x NI: NICKEL (II) ION(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 5 residues within 4Å:- Chain A: P.5, G.7, Y.9, D.61, K.64
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.7, A:Y.9, A:D.61
- Salt bridges: A:K.64
SO4.5: 4 residues within 4Å:- Chain B: P.5, G.7, Y.9, K.64
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:G.7, B:Y.9
- Salt bridges: B:K.64
SO4.9: 5 residues within 4Å:- Chain C: P.5, G.7, Y.9, D.61, K.64
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:G.7, C:Y.9
- Salt bridges: C:K.64
SO4.12: 4 residues within 4Å:- Chain D: P.5, G.7, Y.9, K.64
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:G.7
- Salt bridges: D:K.64
SO4.16: 5 residues within 4Å:- Chain E: P.5, G.7, Y.9, D.61, K.64
3 PLIP interactions:3 interactions with chain E- Hydrogen bonds: E:Y.9, E:D.61
- Salt bridges: E:K.64
SO4.18: 5 residues within 4Å:- Chain F: P.5, G.7, Y.9, D.61, K.64
3 PLIP interactions:3 interactions with chain F- Hydrogen bonds: F:G.7
- Water bridges: F:G.7
- Salt bridges: F:K.64
- 6 x THJ: THIOSULFATE(Non-covalent)
THJ.3: 4 residues within 4Å:- Chain A: E.17, R.47, L.50
- Chain C: H.53
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain C- Water bridges: A:R.47
- Salt bridges: A:R.47, C:H.53
THJ.6: 5 residues within 4Å:- Chain B: H.53, H.54
- Chain E: E.17, R.47, L.50
4 PLIP interactions:2 interactions with chain E, 2 interactions with chain B- Water bridges: E:R.47
- Salt bridges: E:R.47, B:H.53, B:H.54
THJ.7: 6 residues within 4Å:- Chain B: E.17, R.47, L.50
- Chain E: H.1, H.53, H.54
3 PLIP interactions:1 interactions with chain B, 2 interactions with chain E- Salt bridges: B:R.47, E:H.53, E:H.54
THJ.10: 4 residues within 4Å:- Chain A: H.1, H.53
- Chain C: R.47, L.50
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain C- Salt bridges: A:H.53, C:R.47
THJ.13: 3 residues within 4Å:- Chain D: H.53
- Chain F: R.47, L.50
2 PLIP interactions:1 interactions with chain D, 1 interactions with chain F- Salt bridges: D:H.53, F:R.47
THJ.14: 5 residues within 4Å:- Chain D: E.17, R.47, L.50
- Chain F: H.53, H.54
5 PLIP interactions:3 interactions with chain D, 2 interactions with chain F- Hydrogen bonds: D:E.17
- Water bridges: D:R.47
- Salt bridges: D:R.47, F:H.53, F:H.54
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wuerges, J. et al., Crystal structure of nickel-containing superoxide dismutase reveals another type of active site. Proc.Natl.Acad.Sci.USA (2004)
- Release Date
- 2004-05-18
- Peptides
- Superoxide dismutase [Ni]: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x NI: NICKEL (II) ION(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 6 x THJ: THIOSULFATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wuerges, J. et al., Crystal structure of nickel-containing superoxide dismutase reveals another type of active site. Proc.Natl.Acad.Sci.USA (2004)
- Release Date
- 2004-05-18
- Peptides
- Superoxide dismutase [Ni]: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F