SMTL ID : 1q5d.1

Epothilone B-bound Cytochrome P450epoK

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 24 residues within 4Å: Chain A: F.62, L.95, F.96, H.103, R.107, F.114, I.251, A.254, G.255, T.258, T.259, L.295, T.305, R.307, A.357, Y.358, G.359, H.363, C.365, P.366, G.367, L.370, A.371 Ligands: EPB.2 16 PLIP interactions: 15 interactions with chain A, 1 Ligand-Water interactions, Hydrophobic interactions: A:F.96, A:F.114, A:I.251, A:L.295, A:Y.358, A:P.366, A:L.370, A:A.371 Water bridges: A:V.306, A:H.363 Salt bridges: A:H.103, A:R.107, A:R.307, A:H.363 Metal complexes: A:C.365, H2O.1

1 x EPB: 7,11-DIHYDROXY-8,8,10,12,16-PENTAMETHYL-3-[1-METHYL-2-(2-METHYL-THIAZOL-4-YL)VINYL]-4,17-DIOXABICYCLO[14.1.0]HEPTADECANE-5,9-DIONE(Non-covalent)

EPB.2: 19 residues within 4Å: Chain A: R.71, M.90, L.95, F.96, A.180, L.183, G.184, V.188, A.250, A.254, T.258, L.301, G.304, T.305, V.306, F.327, A.402, F.403 Ligands: HEM.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.188, A:A.254, A:L.301, A:V.306, A:F.327, A:A.402, A:F.403 Water bridges: A:G.304, A:P.401 pi-Stacking: A:F.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nagano, S. et al., Crystal structures of epothilone D-bound, epothilone B-bound, and substrate-free forms of cytochrome P450epoK. J.Biol.Chem. (2003)

Release Date

2003-10-28

Peptides

P450 epoxidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

P450 epoxidase

Related Entries With Identical Sequence