SMTL ID : 1q8m.1 (1 other biounit)

Crystal structure of the human myeloid cell activating receptor TREM-1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.13, R.115 Chain B: K.105 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Salt bridges: A:K.13, A:R.115, B:K.105 SO4.2: 1 residues within 4Å: Chain A: R.69 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.69 SO4.3: 3 residues within 4Å: Chain A: K.8 Chain B: K.32, P.107 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Salt bridges: A:K.8, B:K.32 SO4.5: 1 residues within 4Å: Chain B: K.105 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:K.105 SO4.6: 3 residues within 4Å: Chain A: K.105 Chain B: K.13, R.115 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Salt bridges: B:K.13, B:R.115, A:K.105

1 x GSH: GLUTATHIONE(Non-covalent)

GSH.4: 6 residues within 4Å: Chain A: Q.37, T.51, C.54, Y.101 Chain B: D.45, M.48 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.37, A:Q.37, A:T.51, A:Y.101, B:D.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Radaev, S. et al., Crystal structure of the human myeloid cell activating receptor TREM-1. Structure (2003)

Release Date

2003-12-09

Peptides

triggering receptor expressed on myeloid cells 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

triggering receptor expressed on myeloid cells 1

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