SMTL ID : 1q9u.1

Crystal structure of uncharacterized conserved protein DUF302 from Bacillus stearothermophilus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

17 x ZN: ZINC ION(Non-covalent)(Non-functional Binders)

ZN.1: 1 residues within 4Å: Chain A: E.29 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.29, A:E.29 ZN.2: 2 residues within 4Å: Chain A: D.117 Ligands: ZN.4 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.117 ZN.3: 2 residues within 4Å: Chain A: E.23 Ligands: ZN.6 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:E.23, H2O.4, H2O.4, H2O.4, H2O.6 ZN.4: 2 residues within 4Å: Chain A: D.117 Ligands: ZN.2 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.117, A:D.117 ZN.5: 2 residues within 4Å: Chain A: M.4, H.6 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.6, H2O.3, H2O.11 ZN.6: 3 residues within 4Å: Chain A: E.23, Q.36 Ligands: ZN.3 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.23, A:E.23, H2O.4 ZN.7: 4 residues within 4Å: Chain A: F.31, C.60, N.61, C.81 No protein-ligand interaction detected (PLIP) ZN.8: 1 residues within 4Å: Chain B: E.17 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.17, B:E.17, H2O.7 ZN.9: 2 residues within 4Å: Chain B: E.64, R.121 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:E.64 ZN.10: 1 residues within 4Å: Chain B: N.16 No protein-ligand interaction detected (PLIP) ZN.11: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) ZN.12: 2 residues within 4Å: Chain B: E.41, E.45 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:E.41, B:E.41, B:E.45, B:E.45 ZN.13: 1 residues within 4Å: Chain B: E.41 No protein-ligand interaction detected (PLIP) ZN.14: 2 residues within 4Å: Chain B: Y.7, D.127 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:Y.7, B:D.127, B:D.127 ZN.15: 1 residues within 4Å: Chain B: E.71 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:E.71, B:E.71, H2O.8, H2O.11, H2O.12 ZN.16: 2 residues within 4Å: Chain B: E.20, E.23 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.20, B:E.23, H2O.10, H2O.13 ZN.17: 6 residues within 4Å: Chain B: F.31, C.60, N.61, E.64, A.65, C.81 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., Crystal structure analysis of Zinc-binding, uncharacterized protein from Bacillus stearothermophilus. To be Published

Release Date

2004-03-02

Peptides

Uncharacterized protein APC35924: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Uncharacterized protein APC35924