SMTL ID : 1qa7.4 (6 other biounits)

CRYSTAL COMPLEX OF THE 3C PROTEINASE FROM HEPATITIS A VIRUS WITH ITS INHIBITOR AND IMPLICATIONS FOR THE POLYPROTEIN PROCESSING IN HAV

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x IVF: N-(iodoacetyl)-L-valyl-L-phenylalaninamide(Non-covalent)

IVF.1: 10 residues within 4Å: Chain A: Q.15, W.27, V.28, M.29, T.122, N.124, H.145, G.170, M.171, C.172 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:W.27, A:V.28 Hydrogen bonds: A:V.28, A:G.170, A:C.172

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.2: 3 residues within 4Å: Chain A: K.136, R.162, I.198 No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 3 residues within 4Å: Chain A: L.3, R.10, L.129 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.3, A:R.10, A:R.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bergmann, E.M. et al., Crystal structure of an inhibitor complex of the 3C proteinase from hepatitis A virus (HAV) and implications for the polyprotein processing in HAV. Virology (1999)

Release Date

1999-04-20

Peptides

HAV 3C PROTEINASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

HAV 3C PROTEINASE

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