- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 6 residues within 4Å:- Chain A: F.50, R.72, Y.176, Q.240, H.241
- Ligands: HEC.5
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:Y.176, A:Y.176, A:Y.176
- Water bridges: A:R.72, A:R.72, A:R.72
- Salt bridges: A:R.72, A:K.92, A:H.241
SO4.3: 3 residues within 4Å:- Chain A: K.326, R.390
- Chain B: K.388
9 PLIP interactions:3 interactions with chain B, 6 interactions with chain A- Water bridges: B:K.388, B:K.388, A:K.326, A:Q.387, A:Q.387, A:R.390
- Salt bridges: B:K.388, A:K.326, A:R.390
SO4.4: 4 residues within 4Å:- Chain A: N.209, R.377
- Chain B: E.311, F.315
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:N.209
- Water bridges: A:R.377, A:R.377
- Salt bridges: A:R.377
SO4.11: 7 residues within 4Å:- Chain B: F.50, R.72, K.92, Y.176, Q.240, H.241
- Ligands: HEC.14
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:Y.176
- Water bridges: B:R.72, B:R.72, B:Y.176, B:Q.240
- Salt bridges: B:R.72, B:K.92, B:H.241
SO4.12: 3 residues within 4Å:- Chain A: K.388
- Chain B: K.326, R.390
10 PLIP interactions:6 interactions with chain B, 4 interactions with chain A- Water bridges: B:K.326, B:R.390, B:R.390, B:R.390, A:K.388, A:K.388, A:K.388
- Salt bridges: B:K.326, B:R.390, A:K.388
SO4.13: 4 residues within 4Å:- Chain A: E.311, F.315
- Chain B: N.209, R.377
6 PLIP interactions:2 interactions with chain A, 4 interactions with chain B- Water bridges: A:Q.308, A:E.311, B:R.377, B:R.377
- Hydrogen bonds: B:N.209
- Salt bridges: B:R.377
- 10 x HEC: HEME C(Covalent)
HEC.5: 23 residues within 4Å:- Chain A: Y.54, N.55, P.57, D.66, N.67, S.70, R.72, T.73, L.84, A.87, C.88, C.91, K.92, C.172, H.173, Y.176, F.178, V.196, H.241, A.363, H.365
- Ligands: SO4.2, HEC.7
16 PLIP interactions:16 interactions with chain A,- Hydrophobic interactions: A:P.57, A:T.73, A:L.84, A:Y.176, A:Y.176, A:Y.176, A:F.178, A:V.196, A:H.241
- Hydrogen bonds: A:N.55, A:N.55, A:A.363
- Water bridges: A:R.72
- Salt bridges: A:R.72, A:H.241, A:H.365
HEC.6: 19 residues within 4Å:- Chain A: W.11, Y.15, Q.18, F.19, W.22, G.125, C.126, C.129, H.130, L.137, H.161, R.165, V.168, M.264, Y.266, Y.274, S.275, H.277
- Ligands: HEC.7
14 PLIP interactions:14 interactions with chain A,- Hydrophobic interactions: A:W.11, A:Y.15, A:Y.15, A:Q.18, A:Q.18, A:W.22, A:L.137
- Hydrogen bonds: A:Y.266, A:S.275
- Salt bridges: A:H.161, A:R.165, A:H.277
- Metal complexes: A:H.130, A:H.277
HEC.7: 26 residues within 4Å:- Chain A: T.25, Y.28, P.57, R.58, G.59, H.60, Y.62, A.63, D.66, C.91, K.92, I.124, V.168, C.169, Q.171, C.172, H.173, C.259, H.263, M.264, V.279, K.280, E.281
- Ligands: HEC.5, HEC.6, HEC.8
11 PLIP interactions:11 interactions with chain A,- Hydrophobic interactions: A:K.92, A:Q.171, A:H.263, A:V.279
- Hydrogen bonds: A:R.58, A:H.60, A:Y.62, A:D.66
- Salt bridges: A:H.60
- Metal complexes: A:H.60, A:H.173
HEC.8: 22 residues within 4Å:- Chain A: P.57, C.169, H.173, F.244, W.247, H.252, V.257, S.258, C.259, C.262, H.263, E.281, N.282, P.283, L.284, H.365, G.366, Y.368, F.369, H.370
- Ligands: HEC.7, HEC.9
15 PLIP interactions:15 interactions with chain A,- Hydrophobic interactions: A:H.173, A:W.247, A:P.283, A:L.284, A:H.365, A:F.369, A:F.369
- Hydrogen bonds: A:E.281
- Water bridges: A:E.281, A:N.282, A:N.282, A:H.365, A:Y.368
- Metal complexes: A:H.263, A:H.370
HEC.9: 22 residues within 4Å:- Chain A: I.251, H.252, K.255, V.257, C.262, P.283, L.284, M.287, S.290, C.291, C.294, H.295, L.302, I.305, V.306, K.309, F.369, P.372
- Chain B: I.251, H.295
- Ligands: HEC.8, HEC.18
19 PLIP interactions:17 interactions with chain A, 2 interactions with chain B,- Hydrophobic interactions: A:I.251, A:I.251, A:K.255, A:V.257, A:V.257, A:P.283, A:L.284, A:L.302, A:I.305, A:V.306, A:F.369, B:I.251
- Water bridges: A:K.255, A:K.309
- Salt bridges: A:K.255, A:K.309, B:H.295
- Metal complexes: A:H.252, A:H.295
HEC.14: 23 residues within 4Å:- Chain B: Y.54, N.55, P.57, D.66, N.67, S.70, R.72, T.73, L.84, A.87, C.88, C.91, K.92, C.172, H.173, Y.176, F.178, V.196, H.241, A.363, H.365
- Ligands: SO4.11, HEC.16
18 PLIP interactions:18 interactions with chain B,- Hydrophobic interactions: B:P.57, B:T.73, B:L.84, B:Y.176, B:Y.176, B:F.178, B:V.196, B:H.241
- Hydrogen bonds: B:N.55, B:N.55, B:A.363
- Water bridges: B:Y.54, B:Y.54, B:R.72
- Salt bridges: B:R.72, B:H.241, B:H.365
- pi-Stacking: B:H.241
HEC.15: 19 residues within 4Å:- Chain B: W.11, Y.15, Q.18, F.19, W.22, G.125, C.126, C.129, H.130, L.137, H.161, R.165, V.168, M.264, Y.266, Y.274, S.275, H.277
- Ligands: HEC.16
14 PLIP interactions:14 interactions with chain B,- Hydrophobic interactions: B:W.11, B:Y.15, B:Y.15, B:Q.18, B:F.19, B:W.22, B:L.137, B:V.168
- Hydrogen bonds: B:S.275
- Salt bridges: B:H.161, B:R.165, B:H.277
- Metal complexes: B:H.130, B:H.277
HEC.16: 26 residues within 4Å:- Chain B: T.25, Y.28, P.57, R.58, G.59, H.60, Y.62, A.63, D.66, C.91, K.92, I.124, V.168, C.169, Q.171, C.172, H.173, C.259, H.263, M.264, V.279, K.280, E.281
- Ligands: HEC.14, HEC.15, HEC.17
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:K.92, B:I.124, B:I.124, B:Q.171, B:H.263
- Hydrogen bonds: B:R.58, B:H.60, B:Y.62
- Water bridges: B:N.67
- Salt bridges: B:H.60
- Metal complexes: B:H.60, B:H.173
HEC.17: 22 residues within 4Å:- Chain B: P.57, C.169, H.173, F.244, W.247, H.252, V.257, S.258, C.259, C.262, H.263, E.281, N.282, P.283, L.284, H.365, G.366, Y.368, F.369, H.370
- Ligands: HEC.16, HEC.18
12 PLIP interactions:12 interactions with chain B,- Hydrophobic interactions: B:H.173, B:W.247, B:P.283, B:L.284, B:H.365, B:F.369, B:F.369
- Hydrogen bonds: B:Y.368
- Water bridges: B:E.281, B:H.365
- Metal complexes: B:H.263, B:H.370
HEC.18: 21 residues within 4Å:- Chain A: H.295
- Chain B: I.251, H.252, K.255, V.257, D.261, C.262, P.283, L.284, S.290, C.291, N.293, C.294, H.295, L.302, I.305, V.306, K.309, F.369
- Ligands: HEC.9, HEC.17
17 PLIP interactions:1 interactions with chain A, 16 interactions with chain B,- Salt bridges: A:H.295, B:K.255, B:K.309
- Hydrophobic interactions: B:I.251, B:K.255, B:V.257, B:P.283, B:L.284, B:L.302, B:L.302, B:I.305, B:V.306, B:F.369, B:F.369
- Water bridges: B:K.309
- Metal complexes: B:H.252, B:H.295
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Einsle, O. et al., Structure of cytochrome c nitrite reductase. Nature (1999)
- Release Date
- 1999-08-18
- Peptides
- CYTOCHROME C NITRITE REDUCTASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 10 x HEC: HEME C(Covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Einsle, O. et al., Structure of cytochrome c nitrite reductase. Nature (1999)
- Release Date
- 1999-08-18
- Peptides
- CYTOCHROME C NITRITE REDUCTASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B