SMTL ID : 1qex.1

BACTERIOPHAGE T4 GENE PRODUCT 9 (GP9), THE TRIGGER OF TAIL CONTRACTION AND THE LONG TAIL FIBERS CONNECTOR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-hexamer

Ligands

6 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.1: 6 residues within 4Å: Chain A: S.232, S.233, E.234 Chain E: V.237, M.238, R.239 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain E Hydrogen bonds: A:E.234, E:V.237, E:R.239 Salt bridges: E:R.239 EPE.2: 7 residues within 4Å: Chain B: I.231, S.232, S.233, E.234 Chain D: V.237, M.238, R.239 4 PLIP interactions: 2 interactions with chain D, 2 interactions with chain B Hydrogen bonds: D:R.239, D:R.239, B:E.234 Water bridges: B:E.234 EPE.3: 6 residues within 4Å: Chain A: V.237, M.238, R.239 Chain C: S.232, S.233, E.234 4 PLIP interactions: 1 interactions with chain C, 3 interactions with chain A Hydrogen bonds: C:E.234, A:V.237, A:R.239 Salt bridges: A:R.239 EPE.4: 7 residues within 4Å: Chain D: I.231, S.232, S.233, E.234 Chain F: V.237, M.238, R.239 4 PLIP interactions: 2 interactions with chain D, 2 interactions with chain F Hydrogen bonds: D:E.234, F:R.239, F:R.239 Water bridges: D:E.234 EPE.5: 6 residues within 4Å: Chain C: V.237, M.238, R.239 Chain E: S.232, S.233, E.234 4 PLIP interactions: 3 interactions with chain C, 1 interactions with chain E Hydrogen bonds: C:V.237, C:R.239, E:E.234 Salt bridges: C:R.239 EPE.6: 7 residues within 4Å: Chain B: V.237, M.238, R.239 Chain F: I.231, S.232, S.233, E.234 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain F Hydrogen bonds: B:R.239, B:R.239, F:E.234 Water bridges: F:E.234

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kostyuchenko, V.A. et al., The structure of bacteriophage T4 gene product 9: the trigger for tail contraction. Structure Fold.Des. (1999)

Release Date

1999-10-05

Peptides

PROTEIN (BACTERIOPHAGE T4 GENE PRODUCT 9 (GP9)): ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

PROTEIN (BACTERIOPHAGE T4 GENE PRODUCT 9 (GP9))

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