SMTL ID : 1qgx.1

X-RAY STRUCTURE OF YEAST HAL2P

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: E.72, D.142, I.144, D.145 Ligands: MG.2, PO4.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.72, A:D.142, A:I.144, H2O.1 MG.2: 6 residues within 4Å: Chain A: K.39, P.44, E.72 Ligands: MG.1, PO4.3, SO4.4 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.72, H2O.1, H2O.1, H2O.1

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 11 residues within 4Å: Chain A: D.49, E.72, D.142, I.144, D.145, G.146, T.147 Ligands: MG.1, MG.2, SO4.4, AMP.5 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:E.72, A:E.72, A:G.146, A:T.147 Water bridges: A:K.39, A:E.73, A:G.146, A:T.147, A:T.147, A:K.148

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 7 residues within 4Å: Chain A: S.43, P.44, K.148, H.241 Ligands: MG.2, PO4.3, AMP.5 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.43 Water bridges: A:K.148 Salt bridges: A:K.148, A:H.241

1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.5: 12 residues within 4Å: Chain A: D.142, G.240, H.241, D.263, S.264, K.267, R.281, Y.288, E.290, D.294 Ligands: PO4.3, SO4.4 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:G.146, A:S.264, A:R.281, A:Y.288 Water bridges: A:G.236, A:G.236, A:G.240, A:H.241, A:H.241, A:K.267, A:R.281, A:D.294 Salt bridges: A:H.241, A:K.267, A:R.281 pi-Stacking: A:H.241, A:Y.288

1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.6: 4 residues within 4Å: Chain A: M.313, C.349, D.350, Q.353 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Albert, A. et al., X-ray structure of yeast Hal2p, a major target of lithium and sodium toxicity, and identification of framework interactions determining cation sensitivity. J.Mol.Biol. (2000)

Release Date

2000-01-04

Peptides

3',5'-ADENOSINE BISPHOSPHATASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3',5'-ADENOSINE BISPHOSPHATASE

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