SMTL ID : 1qh5.1

HUMAN GLYOXALASE II WITH S-(N-HYDROXY-N-BROMOPHENYLCARBAMOYL)GLUTATHIONE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.54, H.56, H.110, D.134 Ligands: ZN.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.54, A:H.56, A:H.110, A:D.134, H2O.1 ZN.2: 6 residues within 4Å: Chain A: D.58, H.59, D.134, H.173 Ligands: ZN.1, GSH.3 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.58, A:H.59, A:D.134, A:H.173, H2O.1 ZN.4: 6 residues within 4Å: Chain B: H.54, H.56, H.110, D.134 Ligands: ZN.5, GBP.6 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.54, B:H.56, B:H.110, B:D.134, H2O.7 ZN.5: 6 residues within 4Å: Chain B: D.58, H.59, D.134, H.173 Ligands: ZN.4, GBP.6 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.58, B:H.59, B:D.134, B:H.173, H2O.7

1 x GSH: GLUTATHIONE(Non-covalent)

GSH.3: 13 residues within 4Å: Chain A: D.58, H.110, D.134, F.137, C.141, G.142, K.143, Y.145, H.173, Y.175, R.249, K.252 Ligands: ZN.2 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:C.141, A:K.143, A:Y.145, A:Y.175, A:Y.175 Water bridges: A:N.178, A:K.252, A:K.252 Salt bridges: A:K.143, A:R.249, A:K.252

1 x GBP: S-(N-HYDROXY-N-BROMOPHENYLCARBAMOYL)GLUTATHIONE(Non-covalent)

GBP.6: 15 residues within 4Å: Chain B: H.56, D.58, H.110, D.134, F.137, C.141, G.142, K.143, Y.145, H.173, Y.175, R.249, K.252 Ligands: ZN.4, ZN.5 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:H.56, B:Y.145 Hydrogen bonds: B:C.141, B:K.143, B:Y.175, B:Y.175 Water bridges: B:Y.175, B:K.252, B:K.252 Salt bridges: B:K.143, B:R.249, B:K.252 pi-Stacking: B:H.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cameron, A.D. et al., Crystal structure of human glyoxalase II and its complex with a glutathione thiolester substrate analogue. Structure Fold.Des. (1999)

Release Date

1999-09-24

Peptides

PROTEIN (HYDROXYACYLGLUTATHIONE HYDROLASE): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

PROTEIN (HYDROXYACYLGLUTATHIONE HYDROLASE)

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