SMTL ID : 1qhv.1

HUMAN ADENOVIRUS SEROTYPE 2 FIBRE HEAD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

homo-trimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: D.10, R.94, N.95, G.96 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.95, A:G.96 Water bridges: A:R.94, A:R.94, A:R.94, A:R.94, A:R.94 Salt bridges: A:R.94 SO4.2: 3 residues within 4Å: Chain A: K.11 Chain B: T.3, N.6 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:N.6, B:N.6 Salt bridges: A:K.11 SO4.3: 4 residues within 4Å: Chain B: D.10, R.94, N.95, G.96 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:N.95, B:G.96 Water bridges: B:R.94, B:R.94, B:R.94, B:R.94, B:R.94 Salt bridges: B:R.94 SO4.4: 3 residues within 4Å: Chain B: K.11 Chain C: T.3, N.6 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain C Salt bridges: B:K.11 Hydrogen bonds: C:N.6, C:N.6 SO4.5: 4 residues within 4Å: Chain C: D.10, R.94, N.95, G.96 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:N.95, C:G.96 Water bridges: C:R.94, C:R.94, C:R.94, C:R.94, C:R.94 Salt bridges: C:R.94 SO4.6: 3 residues within 4Å: Chain A: T.3, N.6 Chain C: K.11 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain C Hydrogen bonds: A:N.6, A:N.6 Salt bridges: C:K.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

van Raaij, M.J. et al., Structure of the human adenovirus serotype 2 fiber head domain at 1.5 A resolution. Virology (1999)

Release Date

1999-09-29

Peptides

PROTEIN (ADENOVIRUS FIBRE): ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

PROTEIN (ADENOVIRUS FIBRE)