SMTL ID : 1qia.5 (5 other biounits)

CRYSTAL STRUCTURE OF STROMELYSIN CATALYTIC DOMAIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: H.113, H.117, H.123 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.113, A:H.117, A:H.123 ZN.2: 4 residues within 4Å: Chain A: H.63, D.65, H.78, H.91 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.63, A:D.65, A:H.78, A:H.91 ZN.6: 3 residues within 4Å: Chain B: H.113, H.117, H.123 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.113, B:H.117, B:H.123 ZN.7: 4 residues within 4Å: Chain B: H.63, D.65, H.78, H.91 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.63, B:D.65, B:H.78, B:H.91

6 x CA: CALCIUM ION(Non-covalent)

CA.3: 6 residues within 4Å: Chain A: D.70, G.71, G.73, V.75, D.93, E.96 6 PLIP interactions: 6 interactions with chain A Metal complexes: A:D.70, A:G.71, A:G.73, A:V.75, A:D.93, A:E.96 CA.4: 4 residues within 4Å: Chain A: D.53, G.85, N.87, D.89 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.53, A:G.85, A:N.87, A:D.89, H2O.2, H2O.3 CA.5: 3 residues within 4Å: Chain A: D.19, D.94, E.96 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.19, A:D.94, A:E.96, H2O.3, H2O.4 CA.8: 6 residues within 4Å: Chain B: D.70, G.71, G.73, V.75, D.93, E.96 6 PLIP interactions: 6 interactions with chain B Metal complexes: B:D.70, B:G.71, B:G.73, B:V.75, B:D.93, B:E.96 CA.9: 4 residues within 4Å: Chain B: D.53, G.85, N.87, D.89 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.53, B:G.85, B:N.87, B:D.89, H2O.11 CA.10: 3 residues within 4Å: Chain B: D.19, D.94, E.96 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.19, B:D.94, B:D.94, H2O.11, H2O.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pavlovsky, A.G. et al., X-ray structure of human stromelysin catalytic domain complexed with nonpeptide inhibitors: implications for inhibitor selectivity. Protein Sci. (1999)

Release Date

2003-02-11

Peptides

STROMELYSIN-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

STROMELYSIN-1

Related Entries With Identical Sequence