SMTL ID : 1qjp.1

HIGH RESOLUTION STRUCTURE OF THE OUTER MEMBRANE PROTEIN A (OMPA) TRANSMEMBRANE DOMAIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

6 x C8E: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE(Non-functional Binders)

C8E.1: 5 residues within 4Å: Chain A: N.5, W.7, Y.43, F.51, L.79 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.51, A:F.51, A:L.79, A:L.79 C8E.2: 6 residues within 4Å: Chain A: L.13, G.14, W.15, Q.17, L.139, L.164 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:W.15, A:L.139, A:L.164 Hydrogen bonds: A:Q.17 C8E.3: 8 residues within 4Å: Chain A: Y.48, L.83, G.84, Y.85, I.93, Y.94, T.95 Ligands: C8E.6 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.83, A:Y.85, A:Y.85, A:I.93 C8E.4: 5 residues within 4Å: Chain A: Y.55, V.77, G.99, M.100, V.101 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.77, A:V.101 C8E.5: 3 residues within 4Å: Chain A: A.11, A.37, G.38 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:A.11, A:A.37 C8E.6: 5 residues within 4Å: Chain A: T.95, F.123, W.143, N.145 Ligands: C8E.3 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:T.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pautsch, A. et al., High Resolution Structure of the Ompa Membrane Domain. J.Mol.Biol. (2000)

Release Date

2000-06-30

Peptides

OUTER MEMBRANE PROTEIN A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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OUTER MEMBRANE PROTEIN A