1qko.1 | SWISS-MODEL Template Library

SMTL ID : 1qko.1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-trimer

Ligands

3 x RET: RETINAL(Covalent)

RET.1:	17 residues within 4Å: Chain A: Y.83, W.86, T.89, T.90, M.118, G.122, W.138, S.141, T.142, M.145, W.182, Y.185, P.186, W.189, D.212, A.215, K.216 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:Y.83, A:W.86, A:T.90, A:M.145, A:W.182, A:W.182, A:Y.185, A:Y.185, A:Y.185, A:Y.185, A:P.186, A:W.189, A:A.215, A:K.216
RET.2:	17 residues within 4Å: Chain B: Y.83, W.86, T.89, T.90, M.118, G.122, W.138, S.141, T.142, M.145, W.182, Y.185, P.186, W.189, D.212, A.215, K.216 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:Y.83, B:W.86, B:T.90, B:M.145, B:W.182, B:W.182, B:Y.185, B:Y.185, B:Y.185, B:Y.185, B:P.186, B:W.189, B:A.215, B:K.216
RET.3:	17 residues within 4Å: Chain C: Y.83, W.86, T.89, T.90, M.118, G.122, W.138, S.141, T.142, M.145, W.182, Y.185, P.186, W.189, D.212, A.215, K.216 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:Y.83, C:W.86, C:T.90, C:M.145, C:W.182, C:W.182, C:Y.185, C:Y.185, C:Y.185, C:Y.185, C:P.186, C:W.189, C:A.215, C:K.216

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Edman, K. et al., High Resolution X-Ray Structure of an Early Intermediate in the Bacteriorhodopsin Photocycle. Nature (1999)

Release Date

1999-10-24

Peptides

BACTERIORHODOPSIN: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Membrane

We predict this structure to be a membrane protein.
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