- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- hetero-oligomer
- Ligands
- 2 x HEA: HEME-A(Non-covalent)2 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)
PC1.7: 20 residues within 4Å:- Chain A: L.217, F.257, F.304, V.305, W.307, G.315, Q.320, Y.323, F.324
- Chain C: M.99, V.102, W.106, K.110, Y.114, P.121, D.124
- Chain B: R.198
- Chain D: S.31, L.35, N.42
16 PLIP interactions:8 interactions with chain A, 5 interactions with chain C, 1 interactions with chain B, 2 interactions with chain D- Hydrophobic interactions: A:L.217, A:F.257, A:F.304, A:V.305, A:W.307, A:Y.323, A:Y.323, A:F.324, C:V.102, C:W.106, D:L.35
- Hydrogen bonds: D:N.42
- Salt bridges: C:K.110, C:D.124, B:R.198
- pi-Cation interactions: C:Y.114
PC1.8: 23 residues within 4Å:- Chain C: L.55, L.59, M.62, W.66, V.69, V.70, G.73, E.74, H.78, L.86, F.90, I.222, I.225, F.226, V.229, R.233, Q.238, M.239, T.240, Q.243, H.244, V.245, G.246
20 PLIP interactions:20 interactions with chain C- Hydrophobic interactions: C:L.55, C:L.59, C:W.66, C:W.66, C:L.86, C:F.90, C:F.90, C:I.222, C:I.225, C:F.226, C:F.226, C:F.226, C:F.226, C:V.229
- Hydrogen bonds: C:V.245, C:G.246
- Salt bridges: C:E.74, C:H.78, C:H.78, C:R.233
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Harrenga, A. et al., The Cytochrome C Oxidase from Paracoccus Denitrificans Does not Change the Metal Center Ligation Upon Reduction. J.Biol.Chem. (1999)
- Release Date
- 1999-12-02
- Peptides
- CYTOCHROME C OXIDASE POLYPEPTIDE I-BETA: A
CYTOCHROME C OXIDASE POLYPEPTIDE II: B
CYTOCHROME C OXIDASE POLYPEPTIDE III: C
CCYTOCHROME C OXIDASE: D
HEAVY CHAIN ANTIBODY FV FRAGMENT: E
LIGHT CHAIN ANTIBODY FV FRAGMENT: F - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
HF
L
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.00 Å
- Oligo State
- hetero-oligomer
- Ligands
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Harrenga, A. et al., The Cytochrome C Oxidase from Paracoccus Denitrificans Does not Change the Metal Center Ligation Upon Reduction. J.Biol.Chem. (1999)
- Release Date
- 1999-12-02
- Peptides
- CYTOCHROME C OXIDASE POLYPEPTIDE I-BETA: A
CYTOCHROME C OXIDASE POLYPEPTIDE II: B
CYTOCHROME C OXIDASE POLYPEPTIDE III: C
CCYTOCHROME C OXIDASE: D
HEAVY CHAIN ANTIBODY FV FRAGMENT: E
LIGHT CHAIN ANTIBODY FV FRAGMENT: F - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
HF
L