SMTL ID : 1qt1.1

CRYSTAL STRUCTURE OF XYLOSE ISOMERASE FROM STREPTOMYCES DIASTATICUS NO.7 M1033 AT 1.85 A RESOLUTION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-tetramer

Ligands

8 x CO: COBALT (II) ION(Non-covalent)

CO.1: 4 residues within 4Å: Chain A: E.180, E.216, D.244, D.286 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.180, A:E.216, A:D.244, A:D.286 CO.2: 4 residues within 4Å: Chain A: E.216, H.219, D.254, D.256 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.216, A:D.254, A:D.254, A:D.256, H2O.13 CO.3: 4 residues within 4Å: Chain B: E.180, E.216, D.244, D.286 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:E.180, B:E.216, B:D.244, B:D.286 CO.4: 4 residues within 4Å: Chain B: E.216, H.219, D.254, D.256 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.216, B:D.254, B:D.254, B:D.256, H2O.25 CO.5: 4 residues within 4Å: Chain C: E.180, E.216, D.244, D.286 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:E.180, C:E.216, C:D.244, C:D.286 CO.6: 4 residues within 4Å: Chain C: E.216, H.219, D.254, D.256 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:E.216, C:D.254, C:D.254, C:D.256, H2O.38 CO.7: 4 residues within 4Å: Chain D: E.180, E.216, D.244, D.286 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:E.180, D:E.216, D:D.244, D:D.286 CO.8: 4 residues within 4Å: Chain D: E.216, H.219, D.254, D.256 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:E.216, D:D.254, D:D.254, D:D.256, H2O.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, X. et al., Structure of xylose isomerase from Streptomyces diastaticus no. 7 strain M1033 at 1.85 A resolution. Acta Crystallogr.,Sect.D (2000)

Release Date

2000-06-29

Peptides

PROTEIN (XYLOSE ISOMERASE): ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

PROTEIN (XYLOSE ISOMERASE)