SMTL ID : 1qu4.1 (1 other biounit)

CRYSTAL STRUCTURE OF TRYPANOSOMA BRUCEI ORNITHINE DECARBOXYLASE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-dimer

Ligands

2 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 15 residues within 4Å: Chain A: A.67, K.69, D.88, A.111, R.154, H.197, S.200, G.236, G.237, E.274, P.275, G.276, R.277, Y.389 Chain B: C.360 12 PLIP interactions: 11 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:A.67, A:K.69 Hydrogen bonds: A:G.237, A:G.276, A:R.277, A:Y.389, A:Y.389, B:C.360 Salt bridges: A:K.69, A:H.197, A:R.277 pi-Cation interactions: A:H.197 PLP.2: 14 residues within 4Å: Chain A: C.360 Chain B: A.67, K.69, D.88, R.154, H.197, S.200, G.236, G.237, E.274, P.275, G.276, R.277, Y.389 10 PLIP interactions: 9 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:A.67, B:K.69 Hydrogen bonds: B:G.237, B:G.276, B:R.277, B:Y.389, B:Y.389, A:C.360 Salt bridges: B:R.277 pi-Cation interactions: B:H.197

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Grishin, N.V. et al., X-ray structure of ornithine decarboxylase from Trypanosoma brucei: the native structure and the structure in complex with alpha-difluoromethylornithine. Biochemistry (1999)

Release Date

1999-11-17

Peptides

ORNITHINE DECARBOXYLASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

ORNITHINE DECARBOXYLASE

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