SMTL ID : 1qzu.2 (4 other biounits)

crystal structure of human phosphopantothenoylcysteine decarboxylase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.91 Å

Oligo State

homo-trimer

Ligands

3 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 22 residues within 4Å: Chain A: T.27, G.28, S.29, V.30, T.55, R.57, F.61, D.106, A.107, N.108, T.109, A.140, M.141, M.145 Chain C: E.77, W.78, W.81, V.88, H.90, C.118, D.119, C.124 18 PLIP interactions: 11 interactions with chain A, 7 interactions with chain C Hydrophobic interactions: A:V.30, A:F.61, C:E.77, C:W.78, C:W.78, C:W.81, C:V.88, C:V.88 Hydrogen bonds: A:G.28, A:G.28, A:V.30, A:T.55, A:D.106, A:A.107, A:N.108, A:A.140 Salt bridges: A:K.112 pi-Cation interactions: C:H.90 FMN.2: 22 residues within 4Å: Chain A: E.77, W.78, W.81, V.88, H.90, C.118, D.119, C.124 Chain B: T.27, G.28, S.29, V.30, T.55, R.57, F.61, D.106, A.107, N.108, T.109, A.140, M.141, M.145 18 PLIP interactions: 7 interactions with chain A, 11 interactions with chain B Hydrophobic interactions: A:E.77, A:W.78, A:W.78, A:W.81, A:V.88, A:V.88, B:V.30, B:F.61 pi-Cation interactions: A:H.90 Hydrogen bonds: B:G.28, B:G.28, B:V.30, B:T.55, B:D.106, B:A.107, B:N.108, B:A.140 Salt bridges: B:K.112 FMN.3: 22 residues within 4Å: Chain B: E.77, W.78, W.81, V.88, H.90, C.118, D.119, C.124 Chain C: T.27, G.28, S.29, V.30, T.55, R.57, F.61, D.106, A.107, N.108, T.109, A.140, M.141, M.145 18 PLIP interactions: 11 interactions with chain C, 7 interactions with chain B Hydrophobic interactions: C:V.30, C:F.61, B:E.77, B:W.78, B:W.78, B:W.81, B:V.88, B:V.88 Hydrogen bonds: C:G.28, C:G.28, C:V.30, C:T.55, C:D.106, C:A.107, C:N.108, C:A.140 Salt bridges: C:K.112 pi-Cation interactions: B:H.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Manoj, N. et al., Unusual space-group pseudosymmetry in crystals of human phosphopantothenoylcysteine decarboxylase. Acta Crystallogr.,Sect.D (2003)

Release Date

2004-03-23

Peptides

hypothetical protein MDS018: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

hypothetical protein MDS018

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