- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 10 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 4 x UTP: URIDINE 5'-TRIPHOSPHATE(Non-covalent)
UTP.7: 13 residues within 4Å:- Chain A: G.46, S.47, E.59, D.61, E.96, A.126, T.130, H.133, K.152, Y.161, G.172
- Ligands: MN.1, MN.5
13 PLIP interactions:13 interactions with chain A- Hydrophobic interactions: A:A.126
- Hydrogen bonds: A:S.47, A:S.47, A:Y.161
- Water bridges: A:T.130, A:K.152, A:K.152, A:G.172, A:G.172, A:G.172, A:G.172
- Salt bridges: A:K.152, A:K.152
UTP.8: 7 residues within 4Å:- Chain A: K.303, R.310, Y.392, H.396, H.398, T.399
- Ligands: MN.2
12 PLIP interactions:12 interactions with chain A- Hydrogen bonds: A:R.310, A:Y.392, A:T.399
- Water bridges: A:R.299, A:R.310, A:R.310, A:R.310
- Salt bridges: A:K.303, A:K.303, A:R.310, A:H.396, A:H.396
UTP.15: 13 residues within 4Å:- Chain B: G.46, S.47, E.59, D.61, E.96, A.126, T.130, H.133, K.152, Y.161, G.172
- Ligands: MN.9, MN.13
16 PLIP interactions:16 interactions with chain B- Hydrophobic interactions: B:A.126
- Hydrogen bonds: B:S.47, B:S.47, B:T.130, B:Y.161, B:Y.161
- Water bridges: B:T.52, B:T.130, B:K.152, B:K.152, B:G.172, B:G.172, B:G.172, B:G.172
- Salt bridges: B:K.152, B:K.152
UTP.16: 7 residues within 4Å:- Chain B: K.303, R.310, Y.392, H.396, H.398, T.399
- Ligands: MN.10
11 PLIP interactions:11 interactions with chain B- Hydrogen bonds: B:R.310, B:T.399
- Water bridges: B:R.299, B:R.310, B:R.310, B:R.310
- Salt bridges: B:K.303, B:K.303, B:R.310, B:H.396, B:H.396
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Xiong, Y. et al., Crystal structures of an archaeal class I CCA-adding enzyme and its nucleotide complexes. Mol.Cell (2003)
- Release Date
- 2003-12-16
- Peptides
- tRNA nucleotidyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 10 x MN: MANGANESE (II) ION(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 4 x UTP: URIDINE 5'-TRIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Xiong, Y. et al., Crystal structures of an archaeal class I CCA-adding enzyme and its nucleotide complexes. Mol.Cell (2003)
- Release Date
- 2003-12-16
- Peptides
- tRNA nucleotidyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A