- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-dimer
- Ligands
- 10 x GOL: GLYCEROL(Non-functional Binders)
- 2 x P4P: TETRAPHENYLPHOSPHONIUM(Non-covalent)
P4P.3: 4 residues within 4Å:- Chain B: Y.5, Y.35, Y.44
- Ligands: IMD.14
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:Y.5, B:Y.5, B:Y.5, B:Y.35, B:Y.35, B:Y.44, B:Y.44, B:Y.44
- pi-Stacking: B:Y.5
P4P.20: 4 residues within 4Å:- Chain D: Y.5, Y.35, Y.44
- Ligands: IMD.31
9 PLIP interactions:9 interactions with chain D- Hydrophobic interactions: D:Y.5, D:Y.5, D:Y.5, D:Y.35, D:Y.35, D:Y.44, D:Y.44, D:Y.44
- pi-Stacking: D:Y.5
- 22 x IMD: IMIDAZOLE(Non-covalent)
IMD.4: 9 residues within 4Å:- Chain B: Y.152, Y.170, G.171, A.172, Y.187, E.253, I.255
- Ligands: IMD.6, IMD.9
Ligand excluded by PLIPIMD.5: 4 residues within 4Å:- Chain B: P.144, F.224, Y.229
- Ligands: IMD.6
Ligand excluded by PLIPIMD.6: 9 residues within 4Å:- Chain B: P.144, Y.187, F.224, Y.229, E.253, I.255
- Ligands: IMD.4, IMD.5, IMD.9
Ligand excluded by PLIPIMD.7: 5 residues within 4Å:- Chain B: G.141, G.143, D.183, M.185, T.186
Ligand excluded by PLIPIMD.8: 7 residues within 4Å:- Chain B: T.137, E.138, A.139, E.140, S.151, K.154, I.190
Ligand excluded by PLIPIMD.9: 6 residues within 4Å:- Chain B: V.147, L.148, N.149, Y.152
- Ligands: IMD.4, IMD.6
Ligand excluded by PLIPIMD.10: 4 residues within 4Å:- Chain B: K.113, E.117
- Chain D: E.78, F.81
Ligand excluded by PLIPIMD.11: 8 residues within 4Å:- Chain B: F.165, T.166, N.168, Y.260
- Chain D: D.54, L.55, S.58, Y.84
Ligand excluded by PLIPIMD.12: 4 residues within 4Å:- Chain B: R.133, T.196, K.198, I.200
Ligand excluded by PLIPIMD.13: 2 residues within 4Å:- Chain B: Q.177, E.184
Ligand excluded by PLIPIMD.14: 2 residues within 4Å:- Chain B: Y.5
- Ligands: P4P.3
Ligand excluded by PLIPIMD.21: 9 residues within 4Å:- Chain D: Y.152, Y.170, G.171, A.172, Y.187, E.253, I.255
- Ligands: IMD.23, IMD.26
Ligand excluded by PLIPIMD.22: 4 residues within 4Å:- Chain D: P.144, F.224, Y.229
- Ligands: IMD.23
Ligand excluded by PLIPIMD.23: 9 residues within 4Å:- Chain D: P.144, Y.187, F.224, Y.229, E.253, I.255
- Ligands: IMD.21, IMD.22, IMD.26
Ligand excluded by PLIPIMD.24: 5 residues within 4Å:- Chain D: G.141, G.143, D.183, M.185, T.186
Ligand excluded by PLIPIMD.25: 7 residues within 4Å:- Chain D: T.137, E.138, A.139, E.140, S.151, K.154, I.190
Ligand excluded by PLIPIMD.26: 6 residues within 4Å:- Chain D: V.147, L.148, N.149, Y.152
- Ligands: IMD.21, IMD.23
Ligand excluded by PLIPIMD.27: 4 residues within 4Å:- Chain B: E.78, F.81
- Chain D: K.113, E.117
Ligand excluded by PLIPIMD.28: 8 residues within 4Å:- Chain B: D.54, L.55, S.58, Y.84
- Chain D: F.165, T.166, N.168, Y.260
Ligand excluded by PLIPIMD.29: 4 residues within 4Å:- Chain D: R.133, T.196, K.198, I.200
Ligand excluded by PLIPIMD.30: 2 residues within 4Å:- Chain D: Q.177, E.184
Ligand excluded by PLIPIMD.31: 2 residues within 4Å:- Chain D: Y.5
- Ligands: P4P.20
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Newberry, K.J. et al., The structural mechanism for transcription activation by MerR family member multidrug transporter activation, N terminus. J.Biol.Chem. (2004)
- Release Date
- 2004-08-17
- Peptides
- multidrug-efflux transporter regulator: BD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:B
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-dimer
- Ligands
- 10 x GOL: GLYCEROL(Non-functional Binders)
- 2 x P4P: TETRAPHENYLPHOSPHONIUM(Non-covalent)
- 22 x IMD: IMIDAZOLE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Newberry, K.J. et al., The structural mechanism for transcription activation by MerR family member multidrug transporter activation, N terminus. J.Biol.Chem. (2004)
- Release Date
- 2004-08-17
- Peptides
- multidrug-efflux transporter regulator: BD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:B
AD
A