SMTL ID : 1r9f.1

Crystal structure of p19 complexed with 19-bp small interfering RNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain C: S.6, F.48, R.50 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:S.6, C:S.6 Water bridges: C:K.49, C:R.50 Salt bridges: C:R.50 SO4.2: 2 residues within 4Å: Chain C: S.16, T.18 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:S.16, C:S.16 Water bridges: C:W.17 SO4.3: 3 residues within 4Å: Chain F: S.6, F.48, R.50 5 PLIP interactions: 5 interactions with chain F Hydrogen bonds: F:S.6, F:S.6 Water bridges: F:K.49, F:R.50 Salt bridges: F:R.50 SO4.4: 2 residues within 4Å: Chain F: S.16, T.18 3 PLIP interactions: 3 interactions with chain F Hydrogen bonds: F:S.16, F:S.16 Water bridges: F:W.17

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ye, K. et al., Recognition of small interfering RNA by a viral suppressor of RNA. Nature (2003)

Release Date

2004-01-27

Peptides

Core protein P19: CF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

F
A

Core protein P19