- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x FE: FE (III) ION(Non-covalent)
- 6 x FPY: (4S)-5-FLUORO-4-HYDROXY-3,4-DIHYDROPYRIMIDIN-2(1H)-ONE(Non-covalent)
FPY.2: 12 residues within 4Å:- Chain A: H.65, H.67, L.85, F.158, Q.160, I.187, H.218, E.221, H.250, D.317, W.323
- Ligands: FE.1
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.160, A:Q.160
FPY.5: 12 residues within 4Å:- Chain B: H.65, H.67, L.85, F.158, Q.160, I.187, H.218, E.221, H.250, D.317, W.323
- Ligands: FE.4
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Q.160, B:Q.160
FPY.8: 12 residues within 4Å:- Chain C: H.65, H.67, L.85, F.158, Q.160, I.187, H.218, E.221, H.250, D.317, W.323
- Ligands: FE.7
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:Q.160, C:Q.160
FPY.11: 12 residues within 4Å:- Chain D: H.65, H.67, L.85, F.158, Q.160, I.187, H.218, E.221, H.250, D.317, W.323
- Ligands: FE.10
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:Q.160, D:Q.160
- Water bridges: D:E.221, D:E.221
FPY.14: 12 residues within 4Å:- Chain E: H.65, H.67, L.85, F.158, Q.160, I.187, H.218, E.221, H.250, D.317, W.323
- Ligands: FE.13
4 PLIP interactions:4 interactions with chain E- Hydrogen bonds: E:Q.160, E:Q.160
- Water bridges: E:E.221, E:E.221
FPY.17: 12 residues within 4Å:- Chain F: H.65, H.67, L.85, F.158, Q.160, I.187, H.218, E.221, H.250, D.317, W.323
- Ligands: FE.16
4 PLIP interactions:4 interactions with chain F- Hydrogen bonds: F:Q.160, F:Q.160
- Water bridges: F:E.221, F:E.221
- 6 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 5 residues within 4Å:- Chain A: A.132, T.133, K.138, E.175, L.179
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:A.132, A:K.138
GOL.6: 5 residues within 4Å:- Chain B: A.132, T.133, K.138, E.175, L.179
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:A.132, B:K.138
GOL.9: 5 residues within 4Å:- Chain C: A.132, T.133, K.138, E.175, L.179
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:A.132, C:K.138
GOL.12: 5 residues within 4Å:- Chain D: A.132, T.133, K.138, E.175, L.179
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:A.132, D:K.138, D:E.175
GOL.15: 5 residues within 4Å:- Chain E: A.132, T.133, K.138, E.175, L.179
3 PLIP interactions:3 interactions with chain E- Hydrogen bonds: E:A.132, E:K.138, E:E.175
GOL.18: 5 residues within 4Å:- Chain F: A.132, T.133, K.138, E.175, L.179
3 PLIP interactions:3 interactions with chain F- Hydrogen bonds: F:A.132, F:K.138, F:E.175
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mahan, S.D. et al., Random mutagenesis and selection of Escherichia coli cytosine deaminase for cancer gene therapy. Protein Eng.Des.Sel. (2004)
- Release Date
- 2004-10-05
- Peptides
- Cytosine deaminase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.40 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x FE: FE (III) ION(Non-covalent)
- 6 x FPY: (4S)-5-FLUORO-4-HYDROXY-3,4-DIHYDROPYRIMIDIN-2(1H)-ONE(Non-covalent)
- 6 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mahan, S.D. et al., Random mutagenesis and selection of Escherichia coli cytosine deaminase for cancer gene therapy. Protein Eng.Des.Sel. (2004)
- Release Date
- 2004-10-05
- Peptides
- Cytosine deaminase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
A