SMTL ID : 1rf6.1 (3 other biounits)

Structural Studies of Streptococcus pneumoniae EPSP Synthase in S3P-GLP Bound State

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x GPJ: GLYPHOSATE(Non-covalent)

GPJ.1: 13 residues within 4Å: Chain A: K.20, N.90, S.91, G.92, T.93, R.120, Q.168, D.312, E.340, R.343, H.384, R.385 Ligands: S3P.2 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:K.20, A:K.20, A:N.90, A:G.92, A:T.93, A:R.120, A:R.120, A:Q.168, A:Q.168 Water bridges: A:D.47, A:R.96 Salt bridges: A:K.20, A:R.343, A:H.384, A:R.385

1 x S3P: SHIKIMATE-3-PHOSPHATE(Non-covalent)

S3P.2: 15 residues within 4Å: Chain A: K.20, S.21, R.25, T.93, R.124, A.165, S.166, A.167, Q.168, R.193, I.311, D.312, E.335, K.339 Ligands: GPJ.1 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:Q.168 Hydrogen bonds: A:K.20, A:T.93, A:R.124, A:A.167, A:Q.168, A:Q.168, A:D.312, A:K.339 Water bridges: A:R.120, A:A.165, A:S.166, A:S.166, A:Q.168, A:K.339, A:K.339 Salt bridges: A:R.25, A:R.193, A:K.339

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, H. et al., Structural studies of Streptococcus pneumoniae EPSP synthase in unliganded state, tetrahedral intermediate-bound state and S3P-GLP-bound state. Mol.Microbiol. (2004)

Release Date

2004-02-17

Peptides

5-enolpyruvylshikimate-3-phosphate synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

5-enolpyruvylshikimate-3-phosphate synthase

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