- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x HG: MERCURY (II) ION(Non-covalent)
- 6 x EMC: ETHYL MERCURY ION(Non-covalent)
EMC.2: 3 residues within 4Å:- Chain A: F.122, C.124, S.142
1 PLIP interactions:1 interactions with chain A- Metal complexes: A:C.124
EMC.3: 6 residues within 4Å:- Chain A: T.38, C.62, T.73, A.74, C.77
- Ligands: HG.1
1 PLIP interactions:1 interactions with chain A- Metal complexes: A:C.77
EMC.20: 3 residues within 4Å:- Chain B: F.122, C.124, S.142
1 PLIP interactions:1 interactions with chain B- Metal complexes: B:C.124
EMC.21: 6 residues within 4Å:- Chain B: T.38, C.62, T.73, A.74, C.77
- Ligands: HG.19
1 PLIP interactions:1 interactions with chain B- Metal complexes: B:C.77
EMC.38: 3 residues within 4Å:- Chain C: F.122, C.124, S.142
1 PLIP interactions:1 interactions with chain C- Metal complexes: C:C.124
EMC.39: 6 residues within 4Å:- Chain C: T.38, C.62, T.73, A.74, C.77
- Ligands: HG.37
1 PLIP interactions:1 interactions with chain C- Metal complexes: C:C.77
- 6 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 4 residues within 4Å:- Chain A: R.97, Y.98
- Chain C: H.53, K.175
7 PLIP interactions:3 interactions with chain A, 4 interactions with chain C- Hydrogen bonds: A:Y.98, A:Y.98
- Salt bridges: A:R.97, C:H.53, C:K.175
- Water bridges: C:K.175, C:K.175
SO4.5: 3 residues within 4Å:- Chain A: N.165, N.166, H.167
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:N.166, A:N.166, A:H.167
- Water bridges: A:G.134
- Salt bridges: A:H.167
SO4.22: 4 residues within 4Å:- Chain A: H.53, K.175
- Chain B: R.97, Y.98
7 PLIP interactions:4 interactions with chain A, 3 interactions with chain B- Water bridges: A:K.175, A:K.175
- Salt bridges: A:H.53, A:K.175, B:R.97
- Hydrogen bonds: B:Y.98, B:Y.98
SO4.23: 3 residues within 4Å:- Chain B: N.165, N.166, H.167
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:N.166, B:N.166, B:H.167
- Water bridges: B:G.134
- Salt bridges: B:H.167
SO4.40: 4 residues within 4Å:- Chain B: H.53, K.175
- Chain C: R.97, Y.98
7 PLIP interactions:3 interactions with chain C, 4 interactions with chain B- Hydrogen bonds: C:Y.98, C:Y.98
- Salt bridges: C:R.97, B:H.53, B:K.175
- Water bridges: B:K.175, B:K.175
SO4.41: 3 residues within 4Å:- Chain C: N.165, N.166, H.167
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:N.166, C:N.166, C:H.167
- Water bridges: C:G.134
- Salt bridges: C:H.167
- 21 x ACY: ACETIC ACID(Non-functional Binders)
ACY.6: 1 residues within 4Å:- Chain A: R.119
Ligand excluded by PLIPACY.7: 1 residues within 4Å:- Chain A: H.16
Ligand excluded by PLIPACY.8: 2 residues within 4Å:- Chain A: K.93, G.94
Ligand excluded by PLIPACY.9: 2 residues within 4Å:- Chain A: R.162
- Ligands: GOL.17
Ligand excluded by PLIPACY.10: 4 residues within 4Å:- Chain A: S.7, S.18, C.19, T.20
Ligand excluded by PLIPACY.11: 1 residues within 4Å:- Chain A: T.48
Ligand excluded by PLIPACY.12: 1 residues within 4Å:- Chain C: K.52
Ligand excluded by PLIPACY.24: 1 residues within 4Å:- Chain B: R.119
Ligand excluded by PLIPACY.25: 1 residues within 4Å:- Chain B: H.16
Ligand excluded by PLIPACY.26: 2 residues within 4Å:- Chain B: K.93, G.94
Ligand excluded by PLIPACY.27: 2 residues within 4Å:- Chain B: R.162
- Ligands: GOL.35
Ligand excluded by PLIPACY.28: 4 residues within 4Å:- Chain B: S.7, S.18, C.19, T.20
Ligand excluded by PLIPACY.29: 1 residues within 4Å:- Chain B: T.48
Ligand excluded by PLIPACY.30: 1 residues within 4Å:- Chain A: K.52
Ligand excluded by PLIPACY.42: 1 residues within 4Å:- Chain C: R.119
Ligand excluded by PLIPACY.43: 1 residues within 4Å:- Chain C: H.16
Ligand excluded by PLIPACY.44: 2 residues within 4Å:- Chain C: K.93, G.94
Ligand excluded by PLIPACY.45: 2 residues within 4Å:- Chain C: R.162
- Ligands: GOL.53
Ligand excluded by PLIPACY.46: 4 residues within 4Å:- Chain C: S.7, S.18, C.19, T.20
Ligand excluded by PLIPACY.47: 1 residues within 4Å:- Chain C: T.48
Ligand excluded by PLIPACY.48: 1 residues within 4Å:- Chain B: K.52
Ligand excluded by PLIP- 18 x GOL: GLYCEROL(Non-functional Binders)
GOL.13: 2 residues within 4Å:- Chain A: G.134, H.167
Ligand excluded by PLIPGOL.14: 2 residues within 4Å:- Chain A: R.92, S.118
Ligand excluded by PLIPGOL.15: 5 residues within 4Å:- Chain A: K.96
- Chain C: K.96, R.182, M.183
- Ligands: GOL.16
Ligand excluded by PLIPGOL.16: 4 residues within 4Å:- Chain A: K.96
- Ligands: GOL.15, GOL.34, GOL.52
Ligand excluded by PLIPGOL.17: 2 residues within 4Å:- Chain A: I.161
- Ligands: ACY.9
Ligand excluded by PLIPGOL.18: 2 residues within 4Å:- Chain A: I.5, S.7
Ligand excluded by PLIPGOL.31: 2 residues within 4Å:- Chain B: G.134, H.167
Ligand excluded by PLIPGOL.32: 2 residues within 4Å:- Chain B: R.92, S.118
Ligand excluded by PLIPGOL.33: 5 residues within 4Å:- Chain A: K.96, R.182, M.183
- Chain B: K.96
- Ligands: GOL.34
Ligand excluded by PLIPGOL.34: 4 residues within 4Å:- Chain B: K.96
- Ligands: GOL.16, GOL.33, GOL.52
Ligand excluded by PLIPGOL.35: 2 residues within 4Å:- Chain B: I.161
- Ligands: ACY.27
Ligand excluded by PLIPGOL.36: 2 residues within 4Å:- Chain B: I.5, S.7
Ligand excluded by PLIPGOL.49: 2 residues within 4Å:- Chain C: G.134, H.167
Ligand excluded by PLIPGOL.50: 2 residues within 4Å:- Chain C: R.92, S.118
Ligand excluded by PLIPGOL.51: 5 residues within 4Å:- Chain B: K.96, R.182, M.183
- Chain C: K.96
- Ligands: GOL.52
Ligand excluded by PLIPGOL.52: 4 residues within 4Å:- Chain C: K.96
- Ligands: GOL.16, GOL.34, GOL.51
Ligand excluded by PLIPGOL.53: 2 residues within 4Å:- Chain C: I.161
- Ligands: ACY.45
Ligand excluded by PLIPGOL.54: 2 residues within 4Å:- Chain C: I.5, S.7
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sinha, S.C. et al., Crystal structure of imidazole glycerol-phosphate dehydratase: duplication of an unusual fold. J.Biol.Chem. (2004)
- Release Date
- 2004-05-04
- Peptides
- Imidazole glycerol phosphate dehydratase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x HG: MERCURY (II) ION(Non-covalent)
- 6 x EMC: ETHYL MERCURY ION(Non-covalent)
- 6 x SO4: SULFATE ION(Non-functional Binders)
- 21 x ACY: ACETIC ACID(Non-functional Binders)
- 18 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sinha, S.C. et al., Crystal structure of imidazole glycerol-phosphate dehydratase: duplication of an unusual fold. J.Biol.Chem. (2004)
- Release Date
- 2004-05-04
- Peptides
- Imidazole glycerol phosphate dehydratase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
B