- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.84 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x RIB: alpha-D-ribofuranose(Non-covalent)
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.2: 8 residues within 4Å:- Chain A: P.169, A.170, N.187, T.189, E.190
- Chain B: G.28, E.29, T.30
6 PLIP interactions:2 interactions with chain B, 4 interactions with chain A- Hydrogen bonds: B:T.30, B:T.30, A:A.170, A:N.187, A:N.187, A:E.190
PO4.3: 4 residues within 4Å:- Chain A: H.17, V.38
- Chain B: H.17
- Ligands: PO4.7
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain B- Salt bridges: A:H.17, B:H.17
PO4.6: 8 residues within 4Å:- Chain A: G.28, E.29, T.30
- Chain B: P.169, A.170, N.187, T.189, E.190
6 PLIP interactions:3 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:A.170, B:N.187, B:N.187, A:T.30, A:T.30, A:T.30
PO4.7: 4 residues within 4Å:- Chain A: H.17
- Chain B: H.17, V.38
- Ligands: PO4.3
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain B- Salt bridges: A:H.17, B:H.17
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.4: 13 residues within 4Å:- Chain A: N.187, T.223, L.224, G.225, S.226, G.228, F.243, V.245, A.253, G.254, F.257, H.279, A.282
12 PLIP interactions:12 interactions with chain A- Hydrogen bonds: A:N.187, A:T.223, A:G.225, A:G.254, A:H.279
- Water bridges: A:N.166, A:T.223, A:V.245, A:V.245, A:V.245, A:A.252, A:D.255
ADP.8: 13 residues within 4Å:- Chain B: N.187, T.223, L.224, G.225, S.226, G.228, F.243, V.245, A.253, G.254, F.257, H.279, A.282
12 PLIP interactions:12 interactions with chain B- Hydrogen bonds: B:N.187, B:T.223, B:G.225, B:G.254, B:H.279
- Water bridges: B:N.166, B:T.223, B:V.245, B:V.245, B:V.245, B:A.252, B:D.255
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sigrell, J.A. et al., Structure of Escherichia coli ribokinase in complex with ribose and dinucleotide determined to 1.8 A resolution: insights into a new family of kinase structures. Structure (1998)
- Release Date
- 1998-03-04
- Peptides
- RIBOKINASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.84 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x RIB: alpha-D-ribofuranose(Non-covalent)
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Sigrell, J.A. et al., Structure of Escherichia coli ribokinase in complex with ribose and dinucleotide determined to 1.8 A resolution: insights into a new family of kinase structures. Structure (1998)
- Release Date
- 1998-03-04
- Peptides
- RIBOKINASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A