SMTL ID : 1ro8.2 (1 other biounit)

Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analogue, cytidine-5'-monophosphate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-tetramer

Ligands

4 x C5P: CYTIDINE-5'-MONOPHOSPHATE(Non-covalent)

C5P.1: 15 residues within 4Å: Chain A: G.11, N.12, G.13, P.14, C.33, N.34, Q.35, T.134, S.135, G.136, G.155, I.156, D.157, F.158, Y.159 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:N.12, A:N.12, A:Q.35, A:T.134, A:T.134, A:S.135, A:S.135, A:S.135, A:G.136, A:D.157, A:F.158, A:Y.159, A:Y.159 pi-Stacking: A:Y.159 C5P.2: 15 residues within 4Å: Chain B: G.11, N.12, G.13, P.14, C.33, N.34, Q.35, T.134, S.135, G.136, G.155, I.156, D.157, F.158, Y.159 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:N.12, B:N.12, B:Q.35, B:T.134, B:T.134, B:S.135, B:S.135, B:S.135, B:G.136, B:D.157, B:F.158, B:Y.159, B:Y.159 pi-Stacking: B:Y.159 C5P.3: 15 residues within 4Å: Chain C: G.11, N.12, G.13, P.14, C.33, N.34, Q.35, T.134, S.135, G.136, G.155, I.156, D.157, F.158, Y.159 14 PLIP interactions: 14 interactions with chain C Hydrogen bonds: C:N.12, C:N.12, C:Q.35, C:T.134, C:T.134, C:S.135, C:S.135, C:S.135, C:G.136, C:D.157, C:F.158, C:Y.159, C:Y.159 pi-Stacking: C:Y.159 C5P.4: 15 residues within 4Å: Chain D: G.11, N.12, G.13, P.14, C.33, N.34, Q.35, T.134, S.135, G.136, G.155, I.156, D.157, F.158, Y.159 14 PLIP interactions: 14 interactions with chain D Hydrogen bonds: D:N.12, D:N.12, D:Q.35, D:T.134, D:T.134, D:S.135, D:S.135, D:S.135, D:G.136, D:D.157, D:F.158, D:Y.159, D:Y.159 pi-Stacking: D:Y.159

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chiu, C.P. et al., Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analog. Nat.Struct.Mol.Biol. (2004)

Release Date

2004-02-03

Peptides

alpha-2,3/8-sialyltransferase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

D
B

alpha-2,3/8-sialyltransferase

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