SMTL ID : 1rpa.1

THREE-DIMENSIONAL STRUCTURE OF RAT ACID PHOSPHATASE IN COMPLEX WITH L(+) TARTRATE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-dimer

Ligands

2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 6 residues within 4Å: Chain A: N.272, L.274, P.277, N.301, E.302, Y.308 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.4: 6 residues within 4Å: Chain B: N.272, L.274, P.277, N.301, E.302, Y.308 No protein-ligand interaction detected (PLIP)

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain A: N.62, S.64, K.66 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:K.66 Hydrogen bonds: A:S.64, A:K.66 NAG.5: 3 residues within 4Å: Chain B: N.62, S.64, K.66 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:K.66 Hydrogen bonds: B:S.64, B:K.66

2 x TAR: D(-)-TARTARIC ACID(Non-covalent)

TAR.3: 7 residues within 4Å: Chain A: R.11, H.12, R.15, I.18, R.79, H.257, D.258 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:H.12, A:D.258, A:D.258 Salt bridges: A:R.11, A:H.12, A:R.15, A:R.79, A:H.257 TAR.6: 7 residues within 4Å: Chain B: R.11, H.12, R.15, I.18, R.79, H.257, D.258 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:H.12, B:H.257, B:D.258, B:D.258 Salt bridges: B:R.11, B:H.12, B:R.15, B:R.79, B:H.257

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lindqvist, Y. et al., Three-dimensional structure of rat acid phosphatase in complex with L(+)-tartrate. J.Biol.Chem. (1993)

Release Date

1994-05-31

Peptides

PROSTATIC ACID PHOSPHATASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PROSTATIC ACID PHOSPHATASE

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