SMTL ID : 1rqe.1

Propionibacterium shermanii transcarboxylase 5S subunit bound to oxaloacetate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x OAA: OXALOACETATE ION(Non-covalent)

OAA.1: 9 residues within 4Å: Chain A: R.33, D.34, Q.37, L.102, R.104, K.195, H.226, H.228 Ligands: CO.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.102 Hydrogen bonds: A:R.33, A:R.33, A:Q.37 Salt bridges: A:R.33, A:R.104, A:K.195, A:H.226, A:H.228 OAA.3: 9 residues within 4Å: Chain B: R.33, D.34, Q.37, L.102, R.104, K.195, H.226, H.228 Ligands: CO.4 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:L.102 Hydrogen bonds: B:R.33, B:R.33, B:Q.37 Salt bridges: B:R.33, B:R.104, B:K.195, B:H.226, B:H.228

2 x CO: COBALT (II) ION(Non-covalent)

CO.2: 5 residues within 4Å: Chain A: D.34, H.226, H.228, H.262 Ligands: OAA.1 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.34, A:H.226, A:H.228 CO.4: 5 residues within 4Å: Chain B: D.34, H.226, H.228, H.262 Ligands: OAA.3 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:D.34, B:H.226, B:H.228

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hall, P.R. et al., Transcarboxylase 5S structures: assembly and catalytic mechanism of a multienzyme complex subunit. Embo J. (2004)

Release Date

2004-09-07

Peptides

transcarboxylase 5S subunit: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

transcarboxylase 5S subunit

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